Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
V7AJ17_PHAVU | V7AJL7_PHAVU | V7AJ17 | V7AJL7 | GRAM domain-containing protein. | TCP domain-containing protein. | 0.443 |
V7AJ17_PHAVU | V7ARI1_PHAVU | V7AJ17 | V7ARI1 | GRAM domain-containing protein. | Uncharacterized protein. | 0.419 |
V7AJ17_PHAVU | V7ARK7_PHAVU | V7AJ17 | V7ARK7 | GRAM domain-containing protein. | Auxin response factor; Auxin response factors (ARFs) are transcriptional factors that bind specifically to the DNA sequence 5'-TGTCTC-3' found in the auxin-responsive promoter elements (AuxREs). | 0.502 |
V7AJ17_PHAVU | V7B739_PHAVU | V7AJ17 | V7B739 | GRAM domain-containing protein. | AP2/ERF domain-containing protein. | 0.483 |
V7AJ17_PHAVU | V7BLW8_PHAVU | V7AJ17 | V7BLW8 | GRAM domain-containing protein. | PPC domain-containing protein. | 0.451 |
V7AJ17_PHAVU | V7C8S6_PHAVU | V7AJ17 | V7C8S6 | GRAM domain-containing protein. | Uncharacterized protein. | 0.465 |
V7AJL7_PHAVU | V7AJ17_PHAVU | V7AJL7 | V7AJ17 | TCP domain-containing protein. | GRAM domain-containing protein. | 0.443 |
V7AJL7_PHAVU | V7AQ73_PHAVU | V7AJL7 | V7AQ73 | TCP domain-containing protein. | Auxin-induced protein; Aux/IAA proteins are short-lived transcriptional factors that function as repressors of early auxin response genes at low auxin concentrations. | 0.517 |
V7AJL7_PHAVU | V7ARI1_PHAVU | V7AJL7 | V7ARI1 | TCP domain-containing protein. | Uncharacterized protein. | 0.533 |
V7AJL7_PHAVU | V7ARK7_PHAVU | V7AJL7 | V7ARK7 | TCP domain-containing protein. | Auxin response factor; Auxin response factors (ARFs) are transcriptional factors that bind specifically to the DNA sequence 5'-TGTCTC-3' found in the auxin-responsive promoter elements (AuxREs). | 0.493 |
V7AJL7_PHAVU | V7B6C1_PHAVU | V7AJL7 | V7B6C1 | TCP domain-containing protein. | NAC domain-containing protein. | 0.432 |
V7AJL7_PHAVU | V7B739_PHAVU | V7AJL7 | V7B739 | TCP domain-containing protein. | AP2/ERF domain-containing protein. | 0.439 |
V7AJL7_PHAVU | V7BLW8_PHAVU | V7AJL7 | V7BLW8 | TCP domain-containing protein. | PPC domain-containing protein. | 0.534 |
V7AJL7_PHAVU | V7C8S6_PHAVU | V7AJL7 | V7C8S6 | TCP domain-containing protein. | Uncharacterized protein. | 0.501 |
V7AQ73_PHAVU | V7AJL7_PHAVU | V7AQ73 | V7AJL7 | Auxin-induced protein; Aux/IAA proteins are short-lived transcriptional factors that function as repressors of early auxin response genes at low auxin concentrations. | TCP domain-containing protein. | 0.517 |
V7AQ73_PHAVU | V7ARI1_PHAVU | V7AQ73 | V7ARI1 | Auxin-induced protein; Aux/IAA proteins are short-lived transcriptional factors that function as repressors of early auxin response genes at low auxin concentrations. | Uncharacterized protein. | 0.534 |
V7AQ73_PHAVU | V7ARK7_PHAVU | V7AQ73 | V7ARK7 | Auxin-induced protein; Aux/IAA proteins are short-lived transcriptional factors that function as repressors of early auxin response genes at low auxin concentrations. | Auxin response factor; Auxin response factors (ARFs) are transcriptional factors that bind specifically to the DNA sequence 5'-TGTCTC-3' found in the auxin-responsive promoter elements (AuxREs). | 0.616 |
V7AQ73_PHAVU | V7C8E1_PHAVU | V7AQ73 | V7C8E1 | Auxin-induced protein; Aux/IAA proteins are short-lived transcriptional factors that function as repressors of early auxin response genes at low auxin concentrations. | NAC domain-containing protein. | 0.471 |
V7AQ73_PHAVU | V7C8S6_PHAVU | V7AQ73 | V7C8S6 | Auxin-induced protein; Aux/IAA proteins are short-lived transcriptional factors that function as repressors of early auxin response genes at low auxin concentrations. | Uncharacterized protein. | 0.494 |
V7AQ73_PHAVU | V7CTK0_PHAVU | V7AQ73 | V7CTK0 | Auxin-induced protein; Aux/IAA proteins are short-lived transcriptional factors that function as repressors of early auxin response genes at low auxin concentrations. | NAC domain-containing protein. | 0.496 |
page 1 of 4