Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
AAP1 | T2DPM2_PHAVU | A7XVK0 | T2DPM2 | Amino acid transporter. | GATA transcription factor. | 0.509 |
GATA | T2DPM2_PHAVU | V7BK65 | T2DPM2 | Glutamyl-tRNA(Gln) amidotransferase subunit A, chloroplastic/mitochondrial; Allows the formation of correctly charged Gln-tRNA(Gln) through the transamidation of misacylated Glu-tRNA(Gln) in chloroplasts and mitochondria. The reaction takes place in the presence of glutamine and ATP through an activated gamma-phospho-Glu-tRNA(Gln). | GATA transcription factor. | 0.429 |
T2DPM2_PHAVU | AAP1 | T2DPM2 | A7XVK0 | GATA transcription factor. | Amino acid transporter. | 0.509 |
T2DPM2_PHAVU | GATA | T2DPM2 | V7BK65 | GATA transcription factor. | Glutamyl-tRNA(Gln) amidotransferase subunit A, chloroplastic/mitochondrial; Allows the formation of correctly charged Gln-tRNA(Gln) through the transamidation of misacylated Glu-tRNA(Gln) in chloroplasts and mitochondria. The reaction takes place in the presence of glutamine and ATP through an activated gamma-phospho-Glu-tRNA(Gln). | 0.429 |
T2DPM2_PHAVU | V7BF36_PHAVU | T2DPM2 | V7BF36 | GATA transcription factor. | HMA domain-containing protein. | 0.442 |
V7BF36_PHAVU | T2DPM2_PHAVU | V7BF36 | T2DPM2 | HMA domain-containing protein. | GATA transcription factor. | 0.442 |