V7C4P2_PHAVU protein (Phaseolus vulgaris) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

V7C4P2_PHAVU

C2H2-type domain-containing protein. (672 aa)

Predicted Functional Partners:

V7AI84_PHAVU

0.498

V7AR82_PHAVU

0.498

V7BR32_PHAVU

0.467

V7D257_PHAVU

0.457

V7BDL6_PHAVU

0.456

V7CFM2_PHAVU

0.450

V7C9F2_PHAVU

0.440

V7BUR6_PHAVU

0.439

V7AF89_PHAVU

0.438

V7AFH7_PHAVU

0.438

Your Current Organism:

Phaseolus vulgaris

NCBI taxonomy Id: 3885
Other names: French bean, P. vulgaris, Phaseolus vulgaris L., kidney bean, string bean

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
V7AF89_PHAVU	V7AFH7_PHAVU	V7AF89	V7AFH7	Uncharacterized protein.	Uncharacterized protein.	0.411
V7AF89_PHAVU	V7BDL6_PHAVU	V7AF89	V7BDL6	Uncharacterized protein.	Uncharacterized protein.	0.448
V7AF89_PHAVU	V7C4P2_PHAVU	V7AF89	V7C4P2	Uncharacterized protein.	C2H2-type domain-containing protein.	0.438
V7AFH7_PHAVU	V7AF89_PHAVU	V7AFH7	V7AF89	Uncharacterized protein.	Uncharacterized protein.	0.411
V7AFH7_PHAVU	V7BDL6_PHAVU	V7AFH7	V7BDL6	Uncharacterized protein.	Uncharacterized protein.	0.509
V7AFH7_PHAVU	V7C4P2_PHAVU	V7AFH7	V7C4P2	Uncharacterized protein.	C2H2-type domain-containing protein.	0.438
V7AFH7_PHAVU	V7D257_PHAVU	V7AFH7	V7D257	Uncharacterized protein.	Uncharacterized protein.	0.449
V7AI84_PHAVU	V7AR82_PHAVU	V7AI84	V7AR82	Bifunctional dihydrofolate reductase-thymidylate synthase; Bifunctional enzyme. Involved in de novo dTMP biosynthesis. Key enzyme in folate metabolism; In the C-terminal section; belongs to the thymidylate synthase family.	Bifunctional dihydrofolate reductase-thymidylate synthase; Bifunctional enzyme. Involved in de novo dTMP biosynthesis. Key enzyme in folate metabolism; In the C-terminal section; belongs to the thymidylate synthase family.	0.999
V7AI84_PHAVU	V7C4P2_PHAVU	V7AI84	V7C4P2	Bifunctional dihydrofolate reductase-thymidylate synthase; Bifunctional enzyme. Involved in de novo dTMP biosynthesis. Key enzyme in folate metabolism; In the C-terminal section; belongs to the thymidylate synthase family.	C2H2-type domain-containing protein.	0.498
V7AR82_PHAVU	V7AI84_PHAVU	V7AR82	V7AI84	Bifunctional dihydrofolate reductase-thymidylate synthase; Bifunctional enzyme. Involved in de novo dTMP biosynthesis. Key enzyme in folate metabolism; In the C-terminal section; belongs to the thymidylate synthase family.	Bifunctional dihydrofolate reductase-thymidylate synthase; Bifunctional enzyme. Involved in de novo dTMP biosynthesis. Key enzyme in folate metabolism; In the C-terminal section; belongs to the thymidylate synthase family.	0.999
V7AR82_PHAVU	V7C4P2_PHAVU	V7AR82	V7C4P2	Bifunctional dihydrofolate reductase-thymidylate synthase; Bifunctional enzyme. Involved in de novo dTMP biosynthesis. Key enzyme in folate metabolism; In the C-terminal section; belongs to the thymidylate synthase family.	C2H2-type domain-containing protein.	0.498
V7BDL6_PHAVU	V7AF89_PHAVU	V7BDL6	V7AF89	Uncharacterized protein.	Uncharacterized protein.	0.448
V7BDL6_PHAVU	V7AFH7_PHAVU	V7BDL6	V7AFH7	Uncharacterized protein.	Uncharacterized protein.	0.509
V7BDL6_PHAVU	V7C4P2_PHAVU	V7BDL6	V7C4P2	Uncharacterized protein.	C2H2-type domain-containing protein.	0.456
V7BR32_PHAVU	V7C4P2_PHAVU	V7BR32	V7C4P2	Uncharacterized protein.	C2H2-type domain-containing protein.	0.467
V7BUR6_PHAVU	V7C4P2_PHAVU	V7BUR6	V7C4P2	Uncharacterized protein.	C2H2-type domain-containing protein.	0.439
V7BUR6_PHAVU	V7C9F2_PHAVU	V7BUR6	V7C9F2	Uncharacterized protein.	Uncharacterized protein.	0.994
V7C4P2_PHAVU	V7AF89_PHAVU	V7C4P2	V7AF89	C2H2-type domain-containing protein.	Uncharacterized protein.	0.438
V7C4P2_PHAVU	V7AFH7_PHAVU	V7C4P2	V7AFH7	C2H2-type domain-containing protein.	Uncharacterized protein.	0.438
V7C4P2_PHAVU	V7AI84_PHAVU	V7C4P2	V7AI84	C2H2-type domain-containing protein.	Bifunctional dihydrofolate reductase-thymidylate synthase; Bifunctional enzyme. Involved in de novo dTMP biosynthesis. Key enzyme in folate metabolism; In the C-terminal section; belongs to the thymidylate synthase family.	0.498