V7CYZ7_PHAVU protein (Phaseolus vulgaris) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

V7CYZ7_PHAVU

BHLH domain-containing protein. (329 aa)

Predicted Functional Partners:

V7BLG2_PHAVU

0.490

V7AVX6_PHAVU

0.474

V7C8G9_PHAVU

0.468

V7CKS2_PHAVU

0.468

V7C9N6_PHAVU

0.446

V7CYH1_PHAVU

0.444

V7AWX4_PHAVU

0.434

V7C9I9_PHAVU

0.427

V7CRN3_PHAVU

0.427

V7AFF9_PHAVU

0.424

Your Current Organism:

Phaseolus vulgaris

NCBI taxonomy Id: 3885
Other names: French bean, P. vulgaris, Phaseolus vulgaris L., kidney bean, string bean

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
V7AFF9_PHAVU	V7BLG2_PHAVU	V7AFF9	V7BLG2	Uncharacterized protein.	Uncharacterized protein.	0.480
V7AFF9_PHAVU	V7CYZ7_PHAVU	V7AFF9	V7CYZ7	Uncharacterized protein.	BHLH domain-containing protein.	0.424
V7AVX6_PHAVU	V7BLG2_PHAVU	V7AVX6	V7BLG2	Uncharacterized protein.	Uncharacterized protein.	0.443
V7AVX6_PHAVU	V7CRN3_PHAVU	V7AVX6	V7CRN3	Uncharacterized protein.	Uncharacterized protein.	0.422
V7AVX6_PHAVU	V7CYZ7_PHAVU	V7AVX6	V7CYZ7	Uncharacterized protein.	BHLH domain-containing protein.	0.474
V7AWX4_PHAVU	V7CYZ7_PHAVU	V7AWX4	V7CYZ7	Uncharacterized protein.	BHLH domain-containing protein.	0.434
V7BLG2_PHAVU	V7AFF9_PHAVU	V7BLG2	V7AFF9	Uncharacterized protein.	Uncharacterized protein.	0.480
V7BLG2_PHAVU	V7AVX6_PHAVU	V7BLG2	V7AVX6	Uncharacterized protein.	Uncharacterized protein.	0.443
V7BLG2_PHAVU	V7C8G9_PHAVU	V7BLG2	V7C8G9	Uncharacterized protein.	BHLH domain-containing protein.	0.434
V7BLG2_PHAVU	V7C9I9_PHAVU	V7BLG2	V7C9I9	Uncharacterized protein.	BHLH domain-containing protein.	0.461
V7BLG2_PHAVU	V7CYZ7_PHAVU	V7BLG2	V7CYZ7	Uncharacterized protein.	BHLH domain-containing protein.	0.490
V7C8G9_PHAVU	V7BLG2_PHAVU	V7C8G9	V7BLG2	BHLH domain-containing protein.	Uncharacterized protein.	0.434
V7C8G9_PHAVU	V7CRN3_PHAVU	V7C8G9	V7CRN3	BHLH domain-containing protein.	Uncharacterized protein.	0.439
V7C8G9_PHAVU	V7CYZ7_PHAVU	V7C8G9	V7CYZ7	BHLH domain-containing protein.	BHLH domain-containing protein.	0.468
V7C9I9_PHAVU	V7BLG2_PHAVU	V7C9I9	V7BLG2	BHLH domain-containing protein.	Uncharacterized protein.	0.461
V7C9I9_PHAVU	V7CRN3_PHAVU	V7C9I9	V7CRN3	BHLH domain-containing protein.	Uncharacterized protein.	0.440
V7C9I9_PHAVU	V7CYZ7_PHAVU	V7C9I9	V7CYZ7	BHLH domain-containing protein.	BHLH domain-containing protein.	0.427
V7C9N6_PHAVU	V7CYZ7_PHAVU	V7C9N6	V7CYZ7	NPH3 domain-containing protein; Belongs to the NPH3 family.	BHLH domain-containing protein.	0.446
V7CKS2_PHAVU	V7CYZ7_PHAVU	V7CKS2	V7CYZ7	C2H2-type domain-containing protein.	BHLH domain-containing protein.	0.468
V7CRN3_PHAVU	V7AVX6_PHAVU	V7CRN3	V7AVX6	Uncharacterized protein.	Uncharacterized protein.	0.422