Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
DVH24_019263 | DVH24_024173 | A0A498I2W9 | A0A498JF69 | E2F_CC-MB domain-containing protein. | LOB domain-containing protein. | 0.422 |
DVH24_024173 | DVH24_019263 | A0A498JF69 | A0A498I2W9 | LOB domain-containing protein. | E2F_CC-MB domain-containing protein. | 0.422 |
DVH24_024173 | DVH24_029555 | A0A498JF69 | A0A498HXG3 | LOB domain-containing protein. | Auxin response factor; Auxin response factors (ARFs) are transcriptional factors that bind specifically to the DNA sequence 5'-TGTCTC-3' found in the auxin-responsive promoter elements (AuxREs). | 0.468 |
DVH24_024173 | DVH24_034847 | A0A498JF69 | A0A498ID96 | LOB domain-containing protein. | E2F_CC-MB domain-containing protein. | 0.422 |
DVH24_029555 | DVH24_024173 | A0A498HXG3 | A0A498JF69 | Auxin response factor; Auxin response factors (ARFs) are transcriptional factors that bind specifically to the DNA sequence 5'-TGTCTC-3' found in the auxin-responsive promoter elements (AuxREs). | LOB domain-containing protein. | 0.468 |
DVH24_034847 | DVH24_024173 | A0A498ID96 | A0A498JF69 | E2F_CC-MB domain-containing protein. | LOB domain-containing protein. | 0.422 |