Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
LOC103695733 | LOC103701488 | A0A2H3WXW3 | A0A2H3XCL7 | WD repeat-containing protein 3. | tRNA-dihydrouridine(47) synthase [NAD(P)(+)]. | 0.453 |
LOC103695733 | LOC103701598 | A0A2H3WXW3 | A0A2H3XCZ6 | WD repeat-containing protein 3. | Transducin beta-like protein 3. | 0.999 |
LOC103695733 | LOC103707235 | A0A2H3WXW3 | A0A2H3XX50 | WD repeat-containing protein 3. | Peter Pan-like protein. | 0.955 |
LOC103695733 | LOC103708402 | A0A2H3WXW3 | A0A2H3Y0W0 | WD repeat-containing protein 3. | Zinc finger CCCH domain-containing protein 24; Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family. | 0.819 |
LOC103695733 | LOC103712943 | A0A2H3WXW3 | A0A2H3YF55 | WD repeat-containing protein 3. | RNA cytidine acetyltransferase; RNA cytidine acetyltransferase with specificity toward both 18S rRNA and tRNAs. Catalyzes the formation of N(4)-acetylcytidine (ac4C) in 18S rRNA. Required for early nucleolar cleavages of precursor rRNA at sites A0, A1 and A2 during 18S rRNA synthesis. Catalyzes the formation of ac4C in serine and leucine tRNAs. Requires a tRNA-binding adapter protein for full tRNA acetyltransferase activity but not for 18S rRNA acetylation. | 0.997 |
LOC103695733 | LOC103716117 | A0A2H3WXW3 | A0A2H3YQA5 | WD repeat-containing protein 3. | U3 small nucleolar RNA-associated protein 18 homolog. | 0.999 |
LOC103695733 | LOC103717625 | A0A2H3WXW3 | A0A2H3YV81 | WD repeat-containing protein 3. | tRNA wybutosine-synthesizing protein 2/3/4 isoform X1. | 0.451 |
LOC103695733 | LOC103717859 | A0A2H3WXW3 | A0A2H3YWN7 | WD repeat-containing protein 3. | Periodic tryptophan protein 2. | 0.999 |
LOC103695733 | LOC103721398 | A0A2H3WXW3 | A0A2H3Z7W1 | WD repeat-containing protein 3. | Ribosome biogenesis protein BOP1 homolog; Required for maturation of ribosomal RNAs and formation of the large ribosomal subunit; Belongs to the WD repeat BOP1/ERB1 family. | 0.980 |
LOC103695998 | LOC103701488 | A0A2H3WYQ3 | A0A2H3XCL7 | tRNA (adenine(58)-N(1))-methyltransferase. | tRNA-dihydrouridine(47) synthase [NAD(P)(+)]. | 0.806 |
LOC103695998 | LOC103701598 | A0A2H3WYQ3 | A0A2H3XCZ6 | tRNA (adenine(58)-N(1))-methyltransferase. | Transducin beta-like protein 3. | 0.867 |
LOC103695998 | LOC103707235 | A0A2H3WYQ3 | A0A2H3XX50 | tRNA (adenine(58)-N(1))-methyltransferase. | Peter Pan-like protein. | 0.856 |
LOC103695998 | LOC103708402 | A0A2H3WYQ3 | A0A2H3Y0W0 | tRNA (adenine(58)-N(1))-methyltransferase. | Zinc finger CCCH domain-containing protein 24; Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family. | 0.874 |
LOC103695998 | LOC103712943 | A0A2H3WYQ3 | A0A2H3YF55 | tRNA (adenine(58)-N(1))-methyltransferase. | RNA cytidine acetyltransferase; RNA cytidine acetyltransferase with specificity toward both 18S rRNA and tRNAs. Catalyzes the formation of N(4)-acetylcytidine (ac4C) in 18S rRNA. Required for early nucleolar cleavages of precursor rRNA at sites A0, A1 and A2 during 18S rRNA synthesis. Catalyzes the formation of ac4C in serine and leucine tRNAs. Requires a tRNA-binding adapter protein for full tRNA acetyltransferase activity but not for 18S rRNA acetylation. | 0.934 |
LOC103695998 | LOC103716117 | A0A2H3WYQ3 | A0A2H3YQA5 | tRNA (adenine(58)-N(1))-methyltransferase. | U3 small nucleolar RNA-associated protein 18 homolog. | 0.527 |
LOC103695998 | LOC103717625 | A0A2H3WYQ3 | A0A2H3YV81 | tRNA (adenine(58)-N(1))-methyltransferase. | tRNA wybutosine-synthesizing protein 2/3/4 isoform X1. | 0.664 |
LOC103695998 | LOC103717859 | A0A2H3WYQ3 | A0A2H3YWN7 | tRNA (adenine(58)-N(1))-methyltransferase. | Periodic tryptophan protein 2. | 0.954 |
LOC103695998 | LOC103721398 | A0A2H3WYQ3 | A0A2H3Z7W1 | tRNA (adenine(58)-N(1))-methyltransferase. | Ribosome biogenesis protein BOP1 homolog; Required for maturation of ribosomal RNAs and formation of the large ribosomal subunit; Belongs to the WD repeat BOP1/ERB1 family. | 0.941 |
LOC103701488 | LOC103695733 | A0A2H3XCL7 | A0A2H3WXW3 | tRNA-dihydrouridine(47) synthase [NAD(P)(+)]. | WD repeat-containing protein 3. | 0.453 |
LOC103701488 | LOC103695998 | A0A2H3XCL7 | A0A2H3WYQ3 | tRNA-dihydrouridine(47) synthase [NAD(P)(+)]. | tRNA (adenine(58)-N(1))-methyltransferase. | 0.806 |
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