STRINGSTRING
LOC103717136 LOC103717136 LOC103708016 LOC103708016 LOC103719106 LOC103719106 LOC103704919 LOC103704919 LOC103721398 LOC103721398 LOC103721552 LOC103721552 LOC103706723 LOC103706723 LOC103715924 LOC103715924 LOC103707235 LOC103707235 LOC103716322 LOC103716322 LOC103702450 LOC103702450
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC103717136Zinc finger CCCH domain-containing protein 55-like. (975 aa)    
Predicted Functional Partners:
LOC103708016
Something about silencing protein 10.
   
 0.979
LOC103719106
Neuroguidin.
   
 0.971
LOC103704919
pre-rRNA-processing protein esf1-like.
   
 
 0.934
LOC103721398
Ribosome biogenesis protein BOP1 homolog; Required for maturation of ribosomal RNAs and formation of the large ribosomal subunit; Belongs to the WD repeat BOP1/ERB1 family.
   
 0.922
LOC103721552
KRR1 small subunit processome component; Required for 40S ribosome biogenesis. Involved in nucleolar processing of pre-18S ribosomal RNA and ribosome assembly.
   
 0.916
LOC103706723
rRNA biogenesis protein RRP5 isoform X1.
   
 0.897
LOC103715924
Pescadillo homolog; Required for maturation of ribosomal RNAs and formation of the large ribosomal subunit; Belongs to the pescadillo family.
   
 0.888
LOC103707235
Peter Pan-like protein.
   
   0.873
LOC103716322
Uncharacterized protein At3g06530.
   
  0.864
LOC103702450
Probable rRNA-processing protein EBP2 homolog.
   
 0.859
Your Current Organism:
Phoenix dactylifera
NCBI taxonomy Id: 42345
Other names: P. dactylifera, Phoenix dactylifera L., date palm
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