STRINGSTRING
LOC103717262 LOC103717262 LOC103711705 LOC103711705 LOC103722849 LOC103722849 LOC113462109 LOC113462109 LOC103698998 LOC103698998 LOC103700613 LOC103700613 LOC103710359 LOC103710359 LOC103721623 LOC103721623 LOC103711731 LOC103711731 LOC103713994 LOC103713994 LOC103713304 LOC103713304
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC103717262Histone deacetylase HDT2-like isoform X1. (321 aa)    
Predicted Functional Partners:
LOC103711705
Nucleolar protein 56-like.
   
 
 0.586
LOC103722849
Nucleolar protein 56-like.
   
 
 0.586
LOC113462109
Nucleolar protein 56-like.
   
 
 0.586
LOC103698998
Mediator of RNA polymerase II transcription subunit 36a-like.
   
 
 0.566
LOC103700613
Probable mediator of RNA polymerase II transcription subunit 36b.
   
 
 0.566
LOC103710359
Probable mediator of RNA polymerase II transcription subunit 36b isoform X1.
   
 
 0.566
LOC103721623
Uncharacterized protein LOC103721623 isoform X1.
   
 
 0.563
LOC103711731
Probable nucleolar protein 5-2 isoform X2.
   
 
 0.526
LOC103713994
Probable nucleolar protein 5-2.
   
 
 0.526
LOC103713304
Probable protein arginine N-methyltransferase 3; Belongs to the class I-like SAM-binding methyltransferase superfamily. Protein arginine N-methyltransferase family.
   
 
 0.522
Your Current Organism:
Phoenix dactylifera
NCBI taxonomy Id: 42345
Other names: P. dactylifera, Phoenix dactylifera L., date palm
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