STRINGSTRING
LOC103722730 LOC103722730 LOC103723029 LOC103723029 LOC103719266 LOC103719266 LOC103723605 LOC103723605 LOC103696041 LOC103696041 LOC103698477 LOC103698477 LOC103705440 LOC103705440
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC103722730Transcription factor ABORTED MICROSPORES. (604 aa)    
Predicted Functional Partners:
LOC103723029
Geranylgeranyl transferase type-1 subunit beta.
    
 
 0.625
LOC103719266
PHD finger protein PERSISTENT TAPETAL CELL 1.
      
 0.517
LOC103723605
Mediator of RNA polymerase II transcription subunit 20; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors.
      
 0.412
LOC103696041
Protein GPR107-like.
      
 0.410
LOC103698477
Protein GPR107-like.
      
 0.410
LOC103705440
Myb family transcription factor PHL5-like isoform X1.
      
 0.403
Your Current Organism:
Phoenix dactylifera
NCBI taxonomy Id: 42345
Other names: P. dactylifera, Phoenix dactylifera L., date palm
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