STRINGSTRING
LOC103724287 LOC103724287 LOC103697101 LOC103697101 LOC103705658 LOC103705658 LOC103701697 LOC103701697 LOC103704334 LOC103704334 LOC103701350 LOC103701350 LOC103705641 LOC103705641 LOC103698228 LOC103698228 LOC103705614 LOC103705614 LOC103718147 LOC103718147 LOC103696251 LOC103696251
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC103724287Squamosa promoter-binding-like protein 6. (997 aa)    
Predicted Functional Partners:
LOC103697101
DNA polymerase delta small subunit isoform X1.
    
 0.693
LOC103705658
Crossover junction endonuclease MUS81.
    
 0.626
LOC103701697
Small nuclear ribonucleoprotein E; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family.
   
 0.613
LOC103704334
Serine/threonine-protein kinase ATG1t.
   
 0.555
LOC103701350
DNA polymerase.
   
 0.520
LOC103705641
Notchless protein homolog isoform X1.
   
 
 0.515
LOC103698228
DNA ligase 6-like isoform X1.
     
 0.491
LOC103705614
DNA ligase.
     
 0.491
LOC103718147
NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 7.
   
   0.479
LOC103696251
Probable small nuclear ribonucleoprotein F isoform X1.
    
  0.470
Your Current Organism:
Phoenix dactylifera
NCBI taxonomy Id: 42345
Other names: P. dactylifera, Phoenix dactylifera L., date palm
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