Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
LOC104210413 | LOC104211301 | A0A1U7V791 | A0A1U7V8P8 | Auxin response factor; Auxin response factors (ARFs) are transcriptional factors that bind specifically to the DNA sequence 5'-TGTCTC-3' found in the auxin-responsive promoter elements (AuxREs). | Uncharacterized protein LOC104211301 isoform X1. | 0.444 |
LOC104210413 | LOC104211690 | A0A1U7V791 | A0A1U7USN8 | Auxin response factor; Auxin response factors (ARFs) are transcriptional factors that bind specifically to the DNA sequence 5'-TGTCTC-3' found in the auxin-responsive promoter elements (AuxREs). | NAC transcription factor 29-like. | 0.559 |
LOC104210413 | LOC104214261 | A0A1U7V791 | A0A1U7V745 | Auxin response factor; Auxin response factors (ARFs) are transcriptional factors that bind specifically to the DNA sequence 5'-TGTCTC-3' found in the auxin-responsive promoter elements (AuxREs). | Blue copper protein-like. | 0.520 |
LOC104210413 | LOC104228862 | A0A1U7V791 | A0A1U7WZR6 | Auxin response factor; Auxin response factors (ARFs) are transcriptional factors that bind specifically to the DNA sequence 5'-TGTCTC-3' found in the auxin-responsive promoter elements (AuxREs). | Probable methyltransferase PMT26. | 0.539 |
LOC104210413 | LOC104231283 | A0A1U7V791 | A0A1U7WRJ5 | Auxin response factor; Auxin response factors (ARFs) are transcriptional factors that bind specifically to the DNA sequence 5'-TGTCTC-3' found in the auxin-responsive promoter elements (AuxREs). | Transcription factor TCP11-like. | 0.407 |
LOC104210413 | LOC104241638 | A0A1U7V791 | A0A1U7XS63 | Auxin response factor; Auxin response factors (ARFs) are transcriptional factors that bind specifically to the DNA sequence 5'-TGTCTC-3' found in the auxin-responsive promoter elements (AuxREs). | Methyltransferase. | 0.488 |
LOC104210413 | LOC104244926 | A0A1U7V791 | A0A1U7Y3P1 | Auxin response factor; Auxin response factors (ARFs) are transcriptional factors that bind specifically to the DNA sequence 5'-TGTCTC-3' found in the auxin-responsive promoter elements (AuxREs). | Probable methyltransferase PMT27. | 0.502 |
LOC104210413 | LOC104249109 | A0A1U7V791 | A0A1U7YYI6 | Auxin response factor; Auxin response factors (ARFs) are transcriptional factors that bind specifically to the DNA sequence 5'-TGTCTC-3' found in the auxin-responsive promoter elements (AuxREs). | Transcription factor TCP9-like. | 0.465 |
LOC104210413 | LOC104249341 | A0A1U7V791 | A0A1U7YY16 | Auxin response factor; Auxin response factors (ARFs) are transcriptional factors that bind specifically to the DNA sequence 5'-TGTCTC-3' found in the auxin-responsive promoter elements (AuxREs). | Methyltransferase. | 0.487 |
LOC104211301 | LOC104210413 | A0A1U7V8P8 | A0A1U7V791 | Uncharacterized protein LOC104211301 isoform X1. | Auxin response factor; Auxin response factors (ARFs) are transcriptional factors that bind specifically to the DNA sequence 5'-TGTCTC-3' found in the auxin-responsive promoter elements (AuxREs). | 0.444 |
LOC104211301 | LOC104211690 | A0A1U7V8P8 | A0A1U7USN8 | Uncharacterized protein LOC104211301 isoform X1. | NAC transcription factor 29-like. | 0.540 |
LOC104211301 | LOC104214261 | A0A1U7V8P8 | A0A1U7V745 | Uncharacterized protein LOC104211301 isoform X1. | Blue copper protein-like. | 0.514 |
LOC104211301 | LOC104228862 | A0A1U7V8P8 | A0A1U7WZR6 | Uncharacterized protein LOC104211301 isoform X1. | Probable methyltransferase PMT26. | 0.538 |
LOC104211301 | LOC104231283 | A0A1U7V8P8 | A0A1U7WRJ5 | Uncharacterized protein LOC104211301 isoform X1. | Transcription factor TCP11-like. | 0.553 |
LOC104211301 | LOC104232217 | A0A1U7V8P8 | A0A1U7X1W8 | Uncharacterized protein LOC104211301 isoform X1. | Auxin response factor 1-like. | 0.488 |
LOC104211301 | LOC104241638 | A0A1U7V8P8 | A0A1U7XS63 | Uncharacterized protein LOC104211301 isoform X1. | Methyltransferase. | 0.542 |
LOC104211301 | LOC104244926 | A0A1U7V8P8 | A0A1U7Y3P1 | Uncharacterized protein LOC104211301 isoform X1. | Probable methyltransferase PMT27. | 0.513 |
LOC104211301 | LOC104249109 | A0A1U7V8P8 | A0A1U7YYI6 | Uncharacterized protein LOC104211301 isoform X1. | Transcription factor TCP9-like. | 0.531 |
LOC104211301 | LOC104249341 | A0A1U7V8P8 | A0A1U7YY16 | Uncharacterized protein LOC104211301 isoform X1. | Methyltransferase. | 0.543 |
LOC104211690 | LOC104210413 | A0A1U7USN8 | A0A1U7V791 | NAC transcription factor 29-like. | Auxin response factor; Auxin response factors (ARFs) are transcriptional factors that bind specifically to the DNA sequence 5'-TGTCTC-3' found in the auxin-responsive promoter elements (AuxREs). | 0.559 |
page 1 of 5