STRINGSTRING
LOC104212034 LOC104212034 LOC104224091 LOC104224091 LOC104225576 LOC104225576 LOC104225338 LOC104225338 LOC104240831 LOC104240831 LOC104249367 LOC104249367 LOC104212465 LOC104212465 LOC104212648 LOC104212648 LOC104227345 LOC104227345 LOC104216856 LOC104216856 LOC104221858 LOC104221858
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC104212034Splicing factor U2af small subunit B-like. (318 aa)    
Predicted Functional Partners:
LOC104224091
U2 snRNP auxiliary factor large subunit; Necessary for the splicing of pre-mRNA. Belongs to the splicing factor SR family.
   
 0.968
LOC104225576
Uncharacterized protein LOC104225576.
   
 0.968
LOC104225338
U2 snRNP auxiliary factor large subunit; Necessary for the splicing of pre-mRNA. Belongs to the splicing factor SR family.
   
 0.968
LOC104240831
U2 snRNP auxiliary factor large subunit; Necessary for the splicing of pre-mRNA. Belongs to the splicing factor SR family.
   
 0.968
LOC104249367
Splicing factor U2af large subunit A-like isoform X4.
   
 0.968
LOC104212465
Splicing factor U2af small subunit B-like.
  
  
 
0.901
LOC104212648
Splicing factor U2af small subunit B-like.
  
  
 
0.901
LOC104227345
Splicing factor U2af small subunit B.
  
  
 
0.901
LOC104216856
Stem-specific protein TSJT1-like.
   
 0.697
LOC104221858
Glucan endo-1,3-beta-glucosidase 12-like.
   
 0.697
Your Current Organism:
Nicotiana sylvestris
NCBI taxonomy Id: 4096
Other names: N. sylvestris, Nicotiana sylvestris Speg. & Comes, wood tobacco
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