STRINGSTRING
LOC104221938 LOC104221938 LOC104241563 LOC104241563 LOC104218536 LOC104218536 LOC104214228 LOC104214228 LOC104227530 LOC104227530 LOC104230827 LOC104230827 LOC104239072 LOC104239072 LOC104224684 LOC104224684 LOC104232854 LOC104232854 LOC104230561 LOC104230561 LOC104234599 LOC104234599
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC104221938Transcription factor HBP-1a-like. (408 aa)    
Predicted Functional Partners:
LOC104241563
Transcription factor MYB59-like.
   
  
 0.821
LOC104218536
Endo-1,3(4)-beta-glucanase 1-like.
      
 0.819
LOC104214228
E3 ubiquitin-protein ligase At3g02290-like.
      
 0.817
LOC104227530
E3 ubiquitin-protein ligase At3g02290-like.
      
 0.817
LOC104230827
E3 ubiquitin-protein ligase At3g02290-like.
      
 0.817
LOC104239072
E3 ubiquitin-protein ligase At3g02290-like.
      
 0.817
LOC104224684
Ocs element-binding factor 1-like.
      
 0.499
LOC104232854
Ocs element-binding factor 1-like.
      
 0.467
LOC104230561
Pentatricopeptide repeat-containing protein At5g39350.
   
  
 0.466
LOC104234599
Pentatricopeptide repeat-containing protein At3g29290.
   
  
 0.466
Your Current Organism:
Nicotiana sylvestris
NCBI taxonomy Id: 4096
Other names: N. sylvestris, Nicotiana sylvestris Speg. & Comes, wood tobacco
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