STRINGSTRING
LOC104223156 LOC104223156 LOC104213755 LOC104213755 LOC104226451 LOC104226451 LOC104230652 LOC104230652 LOC104236737 LOC104236737 LOC104213723 LOC104213723 LOC104247461 LOC104247461 LOC104245636 LOC104245636 LOC104232543 LOC104232543 LOC104218347 LOC104218347 LOC104216229 LOC104216229
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC104223156B3 domain-containing transcription repressor VAL1-like. (854 aa)    
Predicted Functional Partners:
LOC104213755
Chromo domain protein LHP1-like.
      
 0.497
LOC104226451
Chromo domain protein LHP1-like.
      
 0.497
LOC104230652
Nuclear transcription factor Y subunit B-6-like.
      
 0.497
LOC104236737
Mediator of RNA polymerase II transcription subunit 28-like.
  
     0.473
LOC104213723
Ethylene-responsive transcription factor WRI1.
      
 0.471
LOC104247461
Mediator of RNA polymerase II transcription subunit 28 isoform X1.
  
     0.469
LOC104245636
Uncharacterized protein LOC104245636.
  
     0.468
LOC104232543
Uncharacterized protein LOC104232543.
  
     0.467
LOC104218347
Protein MIZU-KUSSEI 1.
  
     0.466
LOC104216229
Histone deacetylase complex subunit SAP18-like.
      
 0.459
Your Current Organism:
Nicotiana sylvestris
NCBI taxonomy Id: 4096
Other names: N. sylvestris, Nicotiana sylvestris Speg. & Comes, wood tobacco
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