STRINGSTRING
LOC104227253 LOC104227253 LOC104246641 LOC104246641 LOC104247253 LOC104247253 LOC104244560 LOC104244560 LOC104239304 LOC104239304 LOC104229930 LOC104229930 LOC104245298 LOC104245298 LOC104228117 LOC104228117 LOC104233147 LOC104233147 LOC104249828 LOC104249828 LOC104243025 LOC104243025
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC104227253Homeobox protein knotted-1-like LET6 isoform X1. (345 aa)    
Predicted Functional Partners:
LOC104246641
Homeobox protein BEL1 homolog.
  
 
 
0.499
LOC104247253
Homeobox protein knotted-1-like 1.
      
 0.499
LOC104244560
BEL1-like homeodomain protein 9.
  
 
 
0.493
LOC104239304
Protein WUSCHEL.
      
 0.452
LOC104229930
BEL1-like homeodomain protein 9.
    
 
 0.428
LOC104245298
BEL1-like homeodomain protein 9.
    
 
 0.428
LOC104228117
Transcription factor AS1.
      
 0.424
LOC104233147
Protein rough sheath 2 homolog.
      
 0.424
LOC104249828
LRR receptor-like serine/threonine-protein kinase HSL2; Belongs to the protein kinase superfamily. Ser/Thr protein kinase family.
      
 0.407
LOC104243025
Protein CUP-SHAPED COTYLEDON 3-like isoform X1.
      
 0.402
Your Current Organism:
Nicotiana sylvestris
NCBI taxonomy Id: 4096
Other names: N. sylvestris, Nicotiana sylvestris Speg. & Comes, wood tobacco
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