STRINGSTRING
LOC104228234 LOC104228234 LOC104232264 LOC104232264 LOC104249324 LOC104249324 LOC104216589 LOC104216589 LOC104213726 LOC104213726 LOC104221727 LOC104221727 LOC104224204 LOC104224204 LOC104237669 LOC104237669 LOC104246566 LOC104246566 LOC104246533 LOC104246533 LOC104239328 LOC104239328
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC104228234B3 domain-containing protein At5g42700-like isoform X1. (286 aa)    
Predicted Functional Partners:
LOC104232264
Uncharacterized protein LOC104232264 isoform X1.
   
 0.542
LOC104249324
Chromatin structure-remodeling complex protein SYD.
   
 0.542
LOC104216589
Auxin response factor; Auxin response factors (ARFs) are transcriptional factors that bind specifically to the DNA sequence 5'-TGTCTC-3' found in the auxin-responsive promoter elements (AuxREs).
  
 
  0.540
LOC104213726
QWRF motif-containing protein 2-like.
  
  0.508
LOC104221727
Protein IQ-DOMAIN 14-like.
  
     0.506
LOC104224204
GDSL esterase/lipase At1g28640-like.
  
 
  0.506
LOC104237669
Uncharacterized protein LOC104237669 isoform X1.
  
 
  0.506
LOC104246566
Growth-regulating factor 9 isoform X1.
  
 
  0.506
LOC104246533
Putative F-box/LRR-repeat protein At5g41840.
  
 
  0.506
LOC104239328
GDSL esterase/lipase At5g03980-like.
  
 
  0.503
Your Current Organism:
Nicotiana sylvestris
NCBI taxonomy Id: 4096
Other names: N. sylvestris, Nicotiana sylvestris Speg. & Comes, wood tobacco
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