Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
LOC104213860 | LOC104230470 | A0A1U7V9Q3 | A0A1U7WWB1 | Uncharacterized protein LOC104213860. | LOB domain-containing protein 16. | 0.517 |
LOC104219291 | LOC104230470 | A0A1U7W0S7 | A0A1U7WWB1 | Histone-lysine N-methyltransferase ATXR2 isoform X1. | LOB domain-containing protein 16. | 0.547 |
LOC104219291 | LOC104239005 | A0A1U7W0S7 | A0A1U7XIG4 | Histone-lysine N-methyltransferase ATXR2 isoform X1. | Auxin response factor; Auxin response factors (ARFs) are transcriptional factors that bind specifically to the DNA sequence 5'-TGTCTC-3' found in the auxin-responsive promoter elements (AuxREs). | 0.604 |
LOC104222474 | LOC104230470 | A0A1U7W083 | A0A1U7WWB1 | Aberrant root formation protein 4 isoform X1. | LOB domain-containing protein 16. | 0.542 |
LOC104230470 | LOC104213860 | A0A1U7WWB1 | A0A1U7V9Q3 | LOB domain-containing protein 16. | Uncharacterized protein LOC104213860. | 0.517 |
LOC104230470 | LOC104219291 | A0A1U7WWB1 | A0A1U7W0S7 | LOB domain-containing protein 16. | Histone-lysine N-methyltransferase ATXR2 isoform X1. | 0.547 |
LOC104230470 | LOC104222474 | A0A1U7WWB1 | A0A1U7W083 | LOB domain-containing protein 16. | Aberrant root formation protein 4 isoform X1. | 0.542 |
LOC104230470 | LOC104232264 | A0A1U7WWB1 | A0A1U7X221 | LOB domain-containing protein 16. | Uncharacterized protein LOC104232264 isoform X1. | 0.542 |
LOC104230470 | LOC104234713 | A0A1U7WWB1 | A0A1U7XAE6 | LOB domain-containing protein 16. | Uncharacterized protein LOC104234713. | 0.514 |
LOC104230470 | LOC104237052 | A0A1U7WWB1 | A0A1U7XIF6 | LOB domain-containing protein 16. | Transcription factor E2FA isoform X1. | 0.522 |
LOC104230470 | LOC104239005 | A0A1U7WWB1 | A0A1U7XIG4 | LOB domain-containing protein 16. | Auxin response factor; Auxin response factors (ARFs) are transcriptional factors that bind specifically to the DNA sequence 5'-TGTCTC-3' found in the auxin-responsive promoter elements (AuxREs). | 0.621 |
LOC104230470 | LOC104243617 | A0A1U7WWB1 | A0A1U7XYU6 | LOB domain-containing protein 16. | WUSCHEL-related homeobox 11 isoform X1. | 0.517 |
LOC104230470 | LOC104249324 | A0A1U7WWB1 | A0A1U7YPY3 | LOB domain-containing protein 16. | Chromatin structure-remodeling complex protein SYD. | 0.542 |
LOC104230470 | LOC104249574 | A0A1U7WWB1 | A0A1U7YQS9 | LOB domain-containing protein 16. | Serine/threonine-protein kinase ULK3; Belongs to the protein kinase superfamily. | 0.501 |
LOC104232264 | LOC104230470 | A0A1U7X221 | A0A1U7WWB1 | Uncharacterized protein LOC104232264 isoform X1. | LOB domain-containing protein 16. | 0.542 |
LOC104232264 | LOC104249324 | A0A1U7X221 | A0A1U7YPY3 | Uncharacterized protein LOC104232264 isoform X1. | Chromatin structure-remodeling complex protein SYD. | 0.466 |
LOC104234713 | LOC104230470 | A0A1U7XAE6 | A0A1U7WWB1 | Uncharacterized protein LOC104234713. | LOB domain-containing protein 16. | 0.514 |
LOC104237052 | LOC104230470 | A0A1U7XIF6 | A0A1U7WWB1 | Transcription factor E2FA isoform X1. | LOB domain-containing protein 16. | 0.522 |
LOC104239005 | LOC104219291 | A0A1U7XIG4 | A0A1U7W0S7 | Auxin response factor; Auxin response factors (ARFs) are transcriptional factors that bind specifically to the DNA sequence 5'-TGTCTC-3' found in the auxin-responsive promoter elements (AuxREs). | Histone-lysine N-methyltransferase ATXR2 isoform X1. | 0.604 |
LOC104239005 | LOC104230470 | A0A1U7XIG4 | A0A1U7WWB1 | Auxin response factor; Auxin response factors (ARFs) are transcriptional factors that bind specifically to the DNA sequence 5'-TGTCTC-3' found in the auxin-responsive promoter elements (AuxREs). | LOB domain-containing protein 16. | 0.621 |
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