STRINGSTRING
LOC104230576 LOC104230576 LOC104241137 LOC104241137 LOC104216286 LOC104216286 LOC104222160 LOC104222160 LOC104234422 LOC104234422 LOC104213532 LOC104213532 LOC104223017 LOC104223017 LOC104225033 LOC104225033 LOC104247689 LOC104247689 LOC104213271 LOC104213271 LOC104228308 LOC104228308
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC104230576Zinc finger CCCH domain-containing protein 69-like isoform X1. (308 aa)    
Predicted Functional Partners:
LOC104241137
E3 ubiquitin-protein ligase UPL4 isoform X1.
     
 0.640
LOC104216286
E3 ubiquitin-protein ligase UPL3-like.
     
 0.616
LOC104222160
E3 ubiquitin-protein ligase UPL3-like.
     
 0.616
LOC104234422
E3 ubiquitin-protein ligase UPL3-like.
     
 0.616
LOC104213532
ubiquitin-40S ribosomal protein S27a.
    
  0.423
LOC104223017
ubiquitin-40S ribosomal protein S27a-like.
    
  0.423
LOC104225033
ubiquitin-40S ribosomal protein S27a-like.
    
  0.423
LOC104247689
E3 ubiquitin-protein ligase RFWD3 isoform X1.
      
 0.418
LOC104213271
Ubiquitin-like modifier-activating enzyme 5.
    
  0.412
LOC104228308
NEDD8-activating enzyme E1 catalytic subunit.
    
  0.412
Your Current Organism:
Nicotiana sylvestris
NCBI taxonomy Id: 4096
Other names: N. sylvestris, Nicotiana sylvestris Speg. & Comes, wood tobacco
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