STRINGSTRING
LOC104231807 LOC104231807 LOC104211677 LOC104211677 LOC104231062 LOC104231062 LOC104240971 LOC104240971 LOC104216109 LOC104216109 LOC104223562 LOC104223562 LOC104216748 LOC104216748 LOC104217468 LOC104217468 LOC104233556 LOC104233556 LOC104245934 LOC104245934 LOC104219350 LOC104219350
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC104231807Transcription factor bHLH121-like. (328 aa)    
Predicted Functional Partners:
LOC104211677
WD repeat-containing protein LWD1.
   
 
 0.748
LOC104231062
Protein TRANSPARENT TESTA GLABRA 1.
   
 
 0.748
LOC104240971
Protein phosphatase 2C and cyclic nucleotide-binding/kinase domain-containing protein.
   
 
 0.604
LOC104216109
Uncharacterized protein LOC104216109.
    
 0.526
LOC104223562
Serine/threonine-protein kinase ATM isoform X1; Belongs to the PI3/PI4-kinase family.
    
 0.526
LOC104216748
Septum-promoting GTP-binding protein 1-like.
    
   0.525
LOC104217468
Septum-promoting GTP-binding protein 1-like.
    
   0.525
LOC104233556
Septum-promoting GTP-binding protein 1-like.
    
   0.525
LOC104245934
Septum-promoting GTP-binding protein 1-like isoform X1.
    
   0.525
LOC104219350
Peptidyl-prolyl cis-trans isomerase.
    
 0.523
Your Current Organism:
Nicotiana sylvestris
NCBI taxonomy Id: 4096
Other names: N. sylvestris, Nicotiana sylvestris Speg. & Comes, wood tobacco
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