STRINGSTRING
LOC104233103 LOC104233103 LOC104222517 LOC104222517 LOC104248118 LOC104248118 LOC104216184 LOC104216184 LOC104227346 LOC104227346 LOC104211926 LOC104211926 LOC104219807 LOC104219807 LOC104221353 LOC104221353 LOC104237206 LOC104237206 LOC104214285 LOC104214285 LOC104217043 LOC104217043
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC104233103Trihelix transcription factor GT-4. (382 aa)    
Predicted Functional Partners:
LOC104222517
Protein GIGANTEA-like.
  
     0.515
LOC104248118
Protein GIGANTEA-like.
  
     0.507
LOC104216184
Pentatricopeptide repeat-containing protein At3g18110, chloroplastic.
  
     0.506
LOC104227346
bZIP transcription factor 60.
      
 0.499
LOC104211926
Uncharacterized protein LOC104211926.
      
 0.497
LOC104219807
Uncharacterized protein LOC104219807.
  
     0.478
LOC104221353
Purine permease 1-like.
  
     0.458
LOC104237206
Purine permease 1-like.
  
     0.458
LOC104214285
Purine permease 1-like.
  
     0.453
LOC104217043
Purine permease 1-like.
  
     0.452
Your Current Organism:
Nicotiana sylvestris
NCBI taxonomy Id: 4096
Other names: N. sylvestris, Nicotiana sylvestris Speg. & Comes, wood tobacco
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