STRINGSTRING
LOC104236321 LOC104236321 LOC104246186 LOC104246186 LOC104246189 LOC104246189 LOC104232248 LOC104232248 LOC104218573 LOC104218573 LOC104220904 LOC104220904 LOC104240642 LOC104240642 LOC104225902 LOC104225902 LOC104240194 LOC104240194 LOC104219756 LOC104219756 LOC104233160 LOC104233160
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC104236321Zinc finger CCCH domain-containing protein 18. (494 aa)    
Predicted Functional Partners:
LOC104246186
U4/U6 small nuclear ribonucleoprotein Prp3.
   
   0.789
LOC104246189
NADH dehydrogenase [ubiquinone] 1 alpha subcomplex assembly factor 3-like.
      
 0.508
LOC104232248
Uncharacterized protein LOC104232248 isoform X1.
      
 0.497
LOC104218573
pre-rRNA-processing protein ESF1.
   
    0.461
LOC104220904
Suppressor of mec-8 and unc-52 protein homolog 1-like.
      
 0.433
LOC104240642
Suppressor of mec-8 and unc-52 protein homolog 1 isoform X1.
      
 0.433
LOC104225902
Gamma-secretase subunit APH1-like.
      
 0.432
LOC104240194
Zinc finger HIT domain-containing protein 2 isoform X1.
   
    0.422
LOC104219756
NADH dehydrogenase [ubiquinone] iron-sulfur protein 6, mitochondrial.
      
 0.418
LOC104233160
U4/U6 small nuclear ribonucleoprotein PRP4-like protein.
    
   0.418
Your Current Organism:
Nicotiana sylvestris
NCBI taxonomy Id: 4096
Other names: N. sylvestris, Nicotiana sylvestris Speg. & Comes, wood tobacco
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