STRINGSTRING
LOC104242130 LOC104242130 LOC104238035 LOC104238035 LOC104224362 LOC104224362 LOC104238050 LOC104238050 LOC104218647 LOC104218647 LOC104229789 LOC104229789 LOC104250075 LOC104250075
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC104242130Zinc finger CCCH domain-containing protein 66-like isoform X1. (705 aa)    
Predicted Functional Partners:
LOC104238035
Dof zinc finger protein DOF3.1-like.
  
    0.437
LOC104224362
Cyclic dof factor 3-like.
  
 
   0.417
LOC104238050
Transcription factor bHLH87-like.
  
   
 0.416
LOC104218647
Floral homeotic protein APETALA 2.
  
     0.413
LOC104229789
AP2-like ethylene-responsive transcription factor TOE3.
  
     0.411
LOC104250075
AP2-like ethylene-responsive transcription factor TOE3 isoform X1.
  
     0.400
Your Current Organism:
Nicotiana sylvestris
NCBI taxonomy Id: 4096
Other names: N. sylvestris, Nicotiana sylvestris Speg. & Comes, wood tobacco
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