STRINGSTRING
LOC104242431 LOC104242431 LOC104236798 LOC104236798 LOC104244764 LOC104244764 LOC104230641 LOC104230641 LOC104212519 LOC104212519 LOC104217172 LOC104217172 LOC104221991 LOC104221991 LOC104221995 LOC104221995 LOC104248298 LOC104248298 LOC104210863 LOC104210863 LOC104221156 LOC104221156
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC104242431Pathogenesis-related homeodomain protein isoform X1. (701 aa)    
Predicted Functional Partners:
LOC104236798
nuA4 complex subunit EAF3 homolog isoform X1.
    
 
 0.901
LOC104244764
nuA4 complex subunit EAF3 homolog isoform X1.
    
 
 0.901
LOC104230641
Probable WRKY transcription factor 19.
   
 
 0.811
LOC104212519
Paired amphipathic helix protein Sin3-like 2 isoform X1.
   
 
 0.799
LOC104217172
Paired amphipathic helix protein Sin3-like 3 isoform X1.
   
 
 0.799
LOC104221991
Paired amphipathic helix protein Sin3-like 2 isoform X1.
   
 
 0.799
LOC104221995
Paired amphipathic helix protein Sin3-like 3.
   
 
 0.799
LOC104248298
Paired amphipathic helix protein Sin3-like 3.
   
 
 0.799
LOC104210863
Histone deacetylase; Belongs to the histone deacetylase family. HD Type 1 subfamily.
   
 
 0.789
LOC104221156
Histone deacetylase; Belongs to the histone deacetylase family. HD Type 1 subfamily.
   
 
 0.789
Your Current Organism:
Nicotiana sylvestris
NCBI taxonomy Id: 4096
Other names: N. sylvestris, Nicotiana sylvestris Speg. & Comes, wood tobacco
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