STRINGSTRING
LOC104244505 LOC104244505 LOC104243355 LOC104243355 LOC104222988 LOC104222988 LOC104226562 LOC104226562 LOC104249769 LOC104249769 LOC104230093 LOC104230093 LOC104213623 LOC104213623 LOC104223411 LOC104223411
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC104244505Axial regulator YABBY 5-like. (190 aa)    
Predicted Functional Partners:
LOC104243355
Uncharacterized protein LOC104243355 isoform X1.
      
 0.481
LOC104222988
Transcription repressor KAN1 isoform X1.
      
 0.456
LOC104226562
Pectate lyase.
      
 0.454
LOC104249769
Probable transcription factor KAN4 isoform X1.
      
 0.442
LOC104230093
Phytosulfokines-like.
  
     0.420
LOC104213623
Dof zinc finger protein DOF3.1-like.
  
     0.416
LOC104223411
Uncharacterized protein LOC104223411.
  
     0.409
Your Current Organism:
Nicotiana sylvestris
NCBI taxonomy Id: 4096
Other names: N. sylvestris, Nicotiana sylvestris Speg. & Comes, wood tobacco
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