STRINGSTRING
LOC104245540 LOC104245540 LOC104218060 LOC104218060 LOC104214141 LOC104214141 LOC104231043 LOC104231043 LOC104238414 LOC104238414 LOC104237819 LOC104237819 LOC104215712 LOC104215712 LOC104233941 LOC104233941 LOC104226731 LOC104226731 LOC104229800 LOC104229800 LOC104242474 LOC104242474
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
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[Homology]
Score
LOC104245540Zinc finger CCCH domain-containing protein 31. (1012 aa)    
Predicted Functional Partners:
LOC104218060
Protein SDE2 homolog.
    
 0.805
LOC104214141
Calcium sensing receptor, chloroplastic.
    
 0.753
LOC104231043
AP-2 complex subunit mu isoform X1; Belongs to the adaptor complexes medium subunit family.
    
 0.753
LOC104238414
AP-2 complex subunit mu-like; Belongs to the adaptor complexes medium subunit family.
    
 0.753
LOC104237819
Nucleolar complex protein 4 homolog B.
   
 0.741
LOC104215712
Beta-adaptin-like protein; Subunit of clathrin-associated adaptor protein complex that plays a role in protein sorting in the late-Golgi/trans-Golgi network (TGN) and/or endosomes. The AP complexes mediate both the recruitment of clathrin to membranes and the recognition of sorting signals within the cytosolic tails of transmembrane cargo molecules.
    
 0.738
LOC104233941
Beta-adaptin-like protein; Subunit of clathrin-associated adaptor protein complex that plays a role in protein sorting in the late-Golgi/trans-Golgi network (TGN) and/or endosomes. The AP complexes mediate both the recruitment of clathrin to membranes and the recognition of sorting signals within the cytosolic tails of transmembrane cargo molecules.
    
 0.738
LOC104226731
Probable U3 small nucleolar RNA-associated protein 7.
   
 0.724
LOC104229800
AP complex subunit sigma; Belongs to the adaptor complexes small subunit family.
    
 0.723
LOC104242474
AP complex subunit sigma; Belongs to the adaptor complexes small subunit family.
    
 0.723
Your Current Organism:
Nicotiana sylvestris
NCBI taxonomy Id: 4096
Other names: N. sylvestris, Nicotiana sylvestris Speg. & Comes, wood tobacco
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