STRINGSTRING
LOC104246588 LOC104246588 LOC104239206 LOC104239206 LOC104224783 LOC104224783 LOC104239002 LOC104239002 LOC104243656 LOC104243656 LOC104243657 LOC104243657 LOC104220020 LOC104220020 LOC104210678 LOC104210678 LOC104232367 LOC104232367 LOC104248917 LOC104248917 LOC104217702 LOC104217702
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
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Gene Fusion
Cooccurrence
Coexpression
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[Homology]
Score
LOC104246588Transcription factor E2FB-like isoform X1. (469 aa)    
Predicted Functional Partners:
LOC104239206
Transcription factor-like protein DPB isoform X1; Involved in the regulation of the G1/S transition. Increases the DNA binding activity of E2F proteins after heterodimerization. Belongs to the E2F/DP family.
  
 0.971
LOC104224783
Retinoblastoma-related protein 1 isoform X1.
   
 0.962
LOC104239002
Protein ALWAYS EARLY 3 isoform X1.
    
 0.778
LOC104243656
Protein ALWAYS EARLY 3-like.
    
 0.778
LOC104243657
Protein ALWAYS EARLY 3-like.
    
 0.778
LOC104220020
Polycomb group protein FERTILIZATION-INDEPENDENT ENDOSPERM.
    
 0.682
LOC104210678
Cyclin-dependent kinases regulatory subunit; Binds to the catalytic subunit of the cyclin dependent kinases and is essential for their biological function.
   
 
 0.666
LOC104232367
Mitogen-activated protein kinase kinase kinase YODA-like; Belongs to the protein kinase superfamily.
     
 0.664
LOC104248917
Protein tesmin/TSO1-like CXC 5.
  
 0.664
LOC104217702
Protein tesmin/TSO1-like CXC 5 isoform X1.
  
 0.663
Your Current Organism:
Nicotiana sylvestris
NCBI taxonomy Id: 4096
Other names: N. sylvestris, Nicotiana sylvestris Speg. & Comes, wood tobacco
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