STRINGSTRING
LOC104248499 LOC104248499 LOC104231062 LOC104231062 NsDFR NsDFR LOC104217085 LOC104217085 LOC104212055 LOC104212055 LOC104211586 LOC104211586 LOC104244678 LOC104244678 LOC104240120 LOC104240120 LOC104242602 LOC104242602 LOC104246294 LOC104246294 LOC104213820 LOC104213820
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC104248499Transcription factor bHLH3. (474 aa)    
Predicted Functional Partners:
LOC104231062
Protein TRANSPARENT TESTA GLABRA 1.
      
 0.499
NsDFR
Dihydroflavonol 4-reductase.
      
 0.499
LOC104217085
Naringenin,2-oxoglutarate 3-dioxygenase; Belongs to the iron/ascorbate-dependent oxidoreductase family.
      
 0.493
LOC104212055
Uncharacterized protein LOC104212055.
  
     0.467
LOC104211586
Uncharacterized protein LOC104211586.
  
     0.466
LOC104244678
Protein FANTASTIC FOUR 3-like.
  
     0.464
LOC104240120
UPF0481 protein At3g47200 isoform X1.
  
     0.456
LOC104242602
Uncharacterized protein LOC104242602.
  
     0.456
LOC104246294
Myb-related protein 330-like isoform X1.
      
 0.446
LOC104213820
Uncharacterized protein LOC104213820.
  
     0.440
Your Current Organism:
Nicotiana sylvestris
NCBI taxonomy Id: 4096
Other names: N. sylvestris, Nicotiana sylvestris Speg. & Comes, wood tobacco
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