STRINGSTRING
LOC104248568 LOC104248568 LOC104247767 LOC104247767 LOC104233993 LOC104233993 LOC104223858 LOC104223858 LOC104230389 LOC104230389 LOC104249007 LOC104249007 LOC104238319 LOC104238319 LOC104234004 LOC104234004 LOC104215280 LOC104215280 LOC104232264 LOC104232264 LOC104249324 LOC104249324
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC104248568Uncharacterized protein LOC104248568. (418 aa)    
Predicted Functional Partners:
LOC104247767
FACT complex subunit SSRP1; Component of the FACT complex, a general chromatin factor that acts to reorganize nucleosomes. The FACT complex is involved in multiple processes that require DNA as a template such as mRNA elongation, DNA replication and DNA repair. During transcription elongation the FACT complex acts as a histone chaperone that both destabilizes and restores nucleosomal structure. It facilitates the passage of RNA polymerase II and transcription by promoting the dissociation of one histone H2A-H2B dimer from the nucleosome, then subsequently promotes the reestablishment o [...]
    
 
 0.796
LOC104233993
DNA-directed RNA polymerases II, IV and V subunit 3.
   
 0.736
LOC104223858
High mobility group B protein 10-like.
    
 0.696
LOC104230389
High mobility group B protein 15-like isoform X1.
    
 0.696
LOC104249007
High mobility group B protein 9-like.
    
 0.696
LOC104238319
Putative high mobility group B protein 11.
    
 0.688
LOC104234004
Actin-related protein 5 isoform X1; Belongs to the actin family.
    
 0.682
LOC104215280
DNA-directed RNA polymerases II and V subunit 6B-like.
   
 0.672
LOC104232264
Uncharacterized protein LOC104232264 isoform X1.
   
 0.656
LOC104249324
Chromatin structure-remodeling complex protein SYD.
   
 0.656
Your Current Organism:
Nicotiana sylvestris
NCBI taxonomy Id: 4096
Other names: N. sylvestris, Nicotiana sylvestris Speg. & Comes, wood tobacco
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