EUGRSUZ_H02675 protein (Eucalyptus grandis) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

EUGRSUZ_H02675

HSF_DOMAIN domain-containing protein. (486 aa)

Predicted Functional Partners:

EUGRSUZ_F02759

0.588

EUGRSUZ_F03043

0.572

EUGRSUZ_J02933

0.568

EUGRSUZ_B03771

0.566

EUGRSUZ_K02240

0.526

EUGRSUZ_K02437

0.519

EUGRSUZ_A01619

0.519

EUGRSUZ_B00440

0.484

EUGRSUZ_B00438

0.484

A0A059D892

0.484

Your Current Organism:

Eucalyptus grandis

NCBI taxonomy Id: 71139
Other names: E. grandis, Eucalyptus grandis W.Hill ex Maiden, rose gum

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
A0A059D892	EUGRSUZ_F03043	A0A059D892	A0A059BVF8	UBIQUITIN_CONJUGAT_2 domain-containing protein; Belongs to the ubiquitin-conjugating enzyme family.	Cytochrome c-type biogenesis protein.	0.456
A0A059D892	EUGRSUZ_H02675	A0A059D892	A0A059B1H6	UBIQUITIN_CONJUGAT_2 domain-containing protein; Belongs to the ubiquitin-conjugating enzyme family.	HSF_DOMAIN domain-containing protein.	0.484
EUGRSUZ_A01619	EUGRSUZ_H02675	A0A059DFU2	A0A059B1H6	Uncharacterized protein.	HSF_DOMAIN domain-containing protein.	0.519
EUGRSUZ_B00438	EUGRSUZ_B00440	A0A059CZA3	A0A059CYX0	UBIQUITIN_CONJUGAT_2 domain-containing protein; Belongs to the ubiquitin-conjugating enzyme family.	UBIQUITIN_CONJUGAT_2 domain-containing protein; Belongs to the ubiquitin-conjugating enzyme family.	0.900
EUGRSUZ_B00438	EUGRSUZ_F03043	A0A059CZA3	A0A059BVF8	UBIQUITIN_CONJUGAT_2 domain-containing protein; Belongs to the ubiquitin-conjugating enzyme family.	Cytochrome c-type biogenesis protein.	0.456
EUGRSUZ_B00438	EUGRSUZ_H02675	A0A059CZA3	A0A059B1H6	UBIQUITIN_CONJUGAT_2 domain-containing protein; Belongs to the ubiquitin-conjugating enzyme family.	HSF_DOMAIN domain-containing protein.	0.484
EUGRSUZ_B00440	EUGRSUZ_B00438	A0A059CYX0	A0A059CZA3	UBIQUITIN_CONJUGAT_2 domain-containing protein; Belongs to the ubiquitin-conjugating enzyme family.	UBIQUITIN_CONJUGAT_2 domain-containing protein; Belongs to the ubiquitin-conjugating enzyme family.	0.900
EUGRSUZ_B00440	EUGRSUZ_F03043	A0A059CYX0	A0A059BVF8	UBIQUITIN_CONJUGAT_2 domain-containing protein; Belongs to the ubiquitin-conjugating enzyme family.	Cytochrome c-type biogenesis protein.	0.456
EUGRSUZ_B00440	EUGRSUZ_H02675	A0A059CYX0	A0A059B1H6	UBIQUITIN_CONJUGAT_2 domain-containing protein; Belongs to the ubiquitin-conjugating enzyme family.	HSF_DOMAIN domain-containing protein.	0.484
EUGRSUZ_B03771	EUGRSUZ_F03043	A0A059DAL2	A0A059BVF8	Proteasome subunit alpha type; The proteasome is a multicatalytic proteinase complex which is characterized by its ability to cleave peptides with Arg, Phe, Tyr, Leu, and Glu adjacent to the leaving group at neutral or slightly basic pH; Belongs to the peptidase T1A family.	Cytochrome c-type biogenesis protein.	0.566
EUGRSUZ_B03771	EUGRSUZ_H02675	A0A059DAL2	A0A059B1H6	Proteasome subunit alpha type; The proteasome is a multicatalytic proteinase complex which is characterized by its ability to cleave peptides with Arg, Phe, Tyr, Leu, and Glu adjacent to the leaving group at neutral or slightly basic pH; Belongs to the peptidase T1A family.	HSF_DOMAIN domain-containing protein.	0.566
EUGRSUZ_F02759	EUGRSUZ_H02675	A0A059BTE2	A0A059B1H6	Uncharacterized protein.	HSF_DOMAIN domain-containing protein.	0.588
EUGRSUZ_F03043	A0A059D892	A0A059BVF8	A0A059D892	Cytochrome c-type biogenesis protein.	UBIQUITIN_CONJUGAT_2 domain-containing protein; Belongs to the ubiquitin-conjugating enzyme family.	0.456
EUGRSUZ_F03043	EUGRSUZ_B00438	A0A059BVF8	A0A059CZA3	Cytochrome c-type biogenesis protein.	UBIQUITIN_CONJUGAT_2 domain-containing protein; Belongs to the ubiquitin-conjugating enzyme family.	0.456
EUGRSUZ_F03043	EUGRSUZ_B00440	A0A059BVF8	A0A059CYX0	Cytochrome c-type biogenesis protein.	UBIQUITIN_CONJUGAT_2 domain-containing protein; Belongs to the ubiquitin-conjugating enzyme family.	0.456
EUGRSUZ_F03043	EUGRSUZ_B03771	A0A059BVF8	A0A059DAL2	Cytochrome c-type biogenesis protein.	Proteasome subunit alpha type; The proteasome is a multicatalytic proteinase complex which is characterized by its ability to cleave peptides with Arg, Phe, Tyr, Leu, and Glu adjacent to the leaving group at neutral or slightly basic pH; Belongs to the peptidase T1A family.	0.566
EUGRSUZ_F03043	EUGRSUZ_H02675	A0A059BVF8	A0A059B1H6	Cytochrome c-type biogenesis protein.	HSF_DOMAIN domain-containing protein.	0.572
EUGRSUZ_F03043	EUGRSUZ_J02933	A0A059BVF8	A0A059AJ04	Cytochrome c-type biogenesis protein.	Uncharacterized protein.	0.568
EUGRSUZ_F03043	EUGRSUZ_K02240	A0A059BVF8	A0A059A5D9	Cytochrome c-type biogenesis protein.	Uncharacterized protein.	0.526
EUGRSUZ_H02675	A0A059D892	A0A059B1H6	A0A059D892	HSF_DOMAIN domain-containing protein.	UBIQUITIN_CONJUGAT_2 domain-containing protein; Belongs to the ubiquitin-conjugating enzyme family.	0.484