STRINGSTRING
EUGRSUZ_H04114 EUGRSUZ_H04114 EUGRSUZ_K01838 EUGRSUZ_K01838 EUGRSUZ_G03259 EUGRSUZ_G03259 EUGRSUZ_K03379 EUGRSUZ_K03379 EUGRSUZ_H01111 EUGRSUZ_H01111 EUGRSUZ_I00235 EUGRSUZ_I00235 EUGRSUZ_I00173 EUGRSUZ_I00173 EUGRSUZ_C00155 EUGRSUZ_C00155 EUGRSUZ_A01957 EUGRSUZ_A01957 EUGRSUZ_K00884 EUGRSUZ_K00884 EUGRSUZ_I02479 EUGRSUZ_I02479
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EUGRSUZ_H04114Uncharacterized protein. (1005 aa)    
Predicted Functional Partners:
EUGRSUZ_K01838
Uncharacterized protein.
    
 0.724
EUGRSUZ_G03259
ERCC4 domain-containing protein.
    
 0.688
EUGRSUZ_K03379
Small nuclear ribonucleoprotein Sm D1; Involved in splicing regulation. Facilitates post- transcriptional gene silencing (PTGS) by limiting the degradation of transgene aberrant RNAs by the RNA quality control (RQC) machinery, thus favoring their entry into cytoplasmic siRNA bodies where they can trigger PTGS. Does not participate in the production of small RNAs. Belongs to the snRNP core protein family.
    
 0.686
EUGRSUZ_H01111
Small nuclear ribonucleoprotein Sm D2.
    
 0.653
EUGRSUZ_I00235
Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.
   
 0.644
EUGRSUZ_I00173
DNA polymerase.
   
 0.614
EUGRSUZ_C00155
Sm domain-containing protein.
    
  0.610
EUGRSUZ_A01957
Uncharacterized protein.
    
 0.583
EUGRSUZ_K00884
EF-hand domain-containing protein.
    
 
 0.573
EUGRSUZ_I02479
EF-hand domain-containing protein.
    
 
 0.573
Your Current Organism:
Eucalyptus grandis
NCBI taxonomy Id: 71139
Other names: E. grandis, Eucalyptus grandis W.Hill ex Maiden, rose gum
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