STRINGSTRING
EUGRSUZ_C01876 EUGRSUZ_C01876 EUGRSUZ_F01474 EUGRSUZ_F01474 EUGRSUZ_E00570 EUGRSUZ_E00570 EUGRSUZ_D01871 EUGRSUZ_D01871 EUGRSUZ_K03379 EUGRSUZ_K03379 EUGRSUZ_F02686 EUGRSUZ_F02686
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EUGRSUZ_C01876Uncharacterized protein. (346 aa)    
Predicted Functional Partners:
EUGRSUZ_F01474
CBFD_NFYB_HMF domain-containing protein.
    
 
 0.781
EUGRSUZ_E00570
CBFD_NFYB_HMF domain-containing protein.
    
 
 0.781
EUGRSUZ_D01871
CBFD_NFYB_HMF domain-containing protein.
    
 
 0.781
EUGRSUZ_K03379
Small nuclear ribonucleoprotein Sm D1; Involved in splicing regulation. Facilitates post- transcriptional gene silencing (PTGS) by limiting the degradation of transgene aberrant RNAs by the RNA quality control (RQC) machinery, thus favoring their entry into cytoplasmic siRNA bodies where they can trigger PTGS. Does not participate in the production of small RNAs. Belongs to the snRNP core protein family.
      
 0.519
EUGRSUZ_F02686
Uncharacterized protein.
    
 
 0.410
Your Current Organism:
Eucalyptus grandis
NCBI taxonomy Id: 71139
Other names: E. grandis, Eucalyptus grandis W.Hill ex Maiden, rose gum
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