EUGRSUZ_F03656 protein (Eucalyptus grandis) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

EUGRSUZ_F03656

Uncharacterized protein. (326 aa)

Predicted Functional Partners:

EUGRSUZ_D00877

0.581

EUGRSUZ_D02382

0.572

EUGRSUZ_A02805

0.473

EUGRSUZ_B02781

0.470

EUGRSUZ_I01552

0.459

EUGRSUZ_F01065

0.459

EUGRSUZ_K01061

0.457

EUGRSUZ_K02699

0.457

EUGRSUZ_F03676

0.457

EUGRSUZ_E03226

0.457

Your Current Organism:

Eucalyptus grandis

NCBI taxonomy Id: 71139
Other names: E. grandis, Eucalyptus grandis W.Hill ex Maiden, rose gum

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
EUGRSUZ_A02805	EUGRSUZ_D00877	A0A059DK15	A0A059CE31	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily. Ser/Thr protein kinase family.	BHLH domain-containing protein.	0.574
EUGRSUZ_A02805	EUGRSUZ_D02382	A0A059DK15	A0A059CIG6	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily. Ser/Thr protein kinase family.	Uncharacterized protein; Belongs to the cytochrome P450 family.	0.477
EUGRSUZ_A02805	EUGRSUZ_F01065	A0A059DK15	A0A059BMK2	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily. Ser/Thr protein kinase family.	Uncharacterized protein.	0.571
EUGRSUZ_A02805	EUGRSUZ_F03656	A0A059DK15	A0A059BWY1	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily. Ser/Thr protein kinase family.	Uncharacterized protein.	0.473
EUGRSUZ_A02805	EUGRSUZ_K02699	A0A059DK15	A0A059A5T0	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily. Ser/Thr protein kinase family.	Uncharacterized protein.	0.701
EUGRSUZ_B02781	EUGRSUZ_D00877	A0A059D5S2	A0A059CE31	Uncharacterized protein.	BHLH domain-containing protein.	0.499
EUGRSUZ_B02781	EUGRSUZ_D02382	A0A059D5S2	A0A059CIG6	Uncharacterized protein.	Uncharacterized protein; Belongs to the cytochrome P450 family.	0.584
EUGRSUZ_B02781	EUGRSUZ_F03656	A0A059D5S2	A0A059BWY1	Uncharacterized protein.	Uncharacterized protein.	0.470
EUGRSUZ_B02781	EUGRSUZ_F03676	A0A059D5S2	A0A059BX08	Uncharacterized protein.	ABC transporter domain-containing protein.	0.483
EUGRSUZ_D00877	EUGRSUZ_A02805	A0A059CE31	A0A059DK15	BHLH domain-containing protein.	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily. Ser/Thr protein kinase family.	0.574
EUGRSUZ_D00877	EUGRSUZ_B02781	A0A059CE31	A0A059D5S2	BHLH domain-containing protein.	Uncharacterized protein.	0.499
EUGRSUZ_D00877	EUGRSUZ_D02382	A0A059CE31	A0A059CIG6	BHLH domain-containing protein.	Uncharacterized protein; Belongs to the cytochrome P450 family.	0.574
EUGRSUZ_D00877	EUGRSUZ_F01065	A0A059CE31	A0A059BMK2	BHLH domain-containing protein.	Uncharacterized protein.	0.571
EUGRSUZ_D00877	EUGRSUZ_F03656	A0A059CE31	A0A059BWY1	BHLH domain-containing protein.	Uncharacterized protein.	0.581
EUGRSUZ_D00877	EUGRSUZ_F03676	A0A059CE31	A0A059BX08	BHLH domain-containing protein.	ABC transporter domain-containing protein.	0.569
EUGRSUZ_D00877	EUGRSUZ_I01552	A0A059CE31	A0A059APL7	BHLH domain-containing protein.	Epimerase domain-containing protein.	0.457
EUGRSUZ_D00877	EUGRSUZ_K02699	A0A059CE31	A0A059A5T0	BHLH domain-containing protein.	Uncharacterized protein.	0.660
EUGRSUZ_D02382	EUGRSUZ_A02805	A0A059CIG6	A0A059DK15	Uncharacterized protein; Belongs to the cytochrome P450 family.	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily. Ser/Thr protein kinase family.	0.477
EUGRSUZ_D02382	EUGRSUZ_B02781	A0A059CIG6	A0A059D5S2	Uncharacterized protein; Belongs to the cytochrome P450 family.	Uncharacterized protein.	0.584
EUGRSUZ_D02382	EUGRSUZ_D00877	A0A059CIG6	A0A059CE31	Uncharacterized protein; Belongs to the cytochrome P450 family.	BHLH domain-containing protein.	0.574