EUGRSUZ_H00609 protein (Eucalyptus grandis) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

EUGRSUZ_H00609

Uncharacterized protein. (712 aa)

Predicted Functional Partners:

A0A058ZSN7

0.470

EUGRSUZ_D02189

0.444

EUGRSUZ_J00297

0.432

EUGRSUZ_G00491

0.428

EUGRSUZ_A00299

0.424

EUGRSUZ_D00102

0.423

EUGRSUZ_H03668

0.422

EUGRSUZ_D00526

0.422

EUGRSUZ_A00042

0.418

EUGRSUZ_B02305

0.417

Your Current Organism:

Eucalyptus grandis

NCBI taxonomy Id: 71139
Other names: E. grandis, Eucalyptus grandis W.Hill ex Maiden, rose gum

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
A0A058ZSN7	EUGRSUZ_B02305	A0A058ZSN7	A0A059D4L1	PEROXIDASE_4 domain-containing protein.	C2H2-type domain-containing protein.	0.465
A0A058ZSN7	EUGRSUZ_D00526	A0A058ZSN7	A0A059CD23	PEROXIDASE_4 domain-containing protein.	Uncharacterized protein.	0.498
A0A058ZSN7	EUGRSUZ_G00491	A0A058ZSN7	A0A059BB61	PEROXIDASE_4 domain-containing protein.	Uncharacterized protein.	0.468
A0A058ZSN7	EUGRSUZ_H00609	A0A058ZSN7	A0A059AW26	PEROXIDASE_4 domain-containing protein.	Uncharacterized protein.	0.470
A0A058ZSN7	EUGRSUZ_J00297	A0A058ZSN7	A0A059AB33	PEROXIDASE_4 domain-containing protein.	Uncharacterized protein.	0.515
EUGRSUZ_A00042	EUGRSUZ_H00609	A0A059DBP2	A0A059AW26	Peroxidase; Removal of H(2)O(2), oxidation of toxic reductants, biosynthesis and degradation of lignin, suberization, auxin catabolism, response to environmental stresses such as wounding, pathogen attack and oxidative stress.	Uncharacterized protein.	0.418
EUGRSUZ_A00042	EUGRSUZ_J00297	A0A059DBP2	A0A059AB33	Peroxidase; Removal of H(2)O(2), oxidation of toxic reductants, biosynthesis and degradation of lignin, suberization, auxin catabolism, response to environmental stresses such as wounding, pathogen attack and oxidative stress.	Uncharacterized protein.	0.414
EUGRSUZ_A00299	EUGRSUZ_H00609	A0A059DC00	A0A059AW26	Peroxidase; Removal of H(2)O(2), oxidation of toxic reductants, biosynthesis and degradation of lignin, suberization, auxin catabolism, response to environmental stresses such as wounding, pathogen attack and oxidative stress.	Uncharacterized protein.	0.424
EUGRSUZ_A00299	EUGRSUZ_J00297	A0A059DC00	A0A059AB33	Peroxidase; Removal of H(2)O(2), oxidation of toxic reductants, biosynthesis and degradation of lignin, suberization, auxin catabolism, response to environmental stresses such as wounding, pathogen attack and oxidative stress.	Uncharacterized protein.	0.407
EUGRSUZ_B02305	A0A058ZSN7	A0A059D4L1	A0A058ZSN7	C2H2-type domain-containing protein.	PEROXIDASE_4 domain-containing protein.	0.465
EUGRSUZ_B02305	EUGRSUZ_H00609	A0A059D4L1	A0A059AW26	C2H2-type domain-containing protein.	Uncharacterized protein.	0.417
EUGRSUZ_D00102	EUGRSUZ_D00526	A0A059CBZ7	A0A059CD23	Germin-like protein.	Uncharacterized protein.	0.447
EUGRSUZ_D00102	EUGRSUZ_G00491	A0A059CBZ7	A0A059BB61	Germin-like protein.	Uncharacterized protein.	0.429
EUGRSUZ_D00102	EUGRSUZ_H00609	A0A059CBZ7	A0A059AW26	Germin-like protein.	Uncharacterized protein.	0.423
EUGRSUZ_D00102	EUGRSUZ_H03668	A0A059CBZ7	A0A059B5M8	Germin-like protein.	PEROXIDASE_4 domain-containing protein; Belongs to the peroxidase family.	0.438
EUGRSUZ_D00526	A0A058ZSN7	A0A059CD23	A0A058ZSN7	Uncharacterized protein.	PEROXIDASE_4 domain-containing protein.	0.498
EUGRSUZ_D00526	EUGRSUZ_D00102	A0A059CD23	A0A059CBZ7	Uncharacterized protein.	Germin-like protein.	0.447
EUGRSUZ_D00526	EUGRSUZ_G00491	A0A059CD23	A0A059BB61	Uncharacterized protein.	Uncharacterized protein.	0.475
EUGRSUZ_D00526	EUGRSUZ_H00609	A0A059CD23	A0A059AW26	Uncharacterized protein.	Uncharacterized protein.	0.422
EUGRSUZ_D00526	EUGRSUZ_H03668	A0A059CD23	A0A059B5M8	Uncharacterized protein.	PEROXIDASE_4 domain-containing protein; Belongs to the peroxidase family.	0.510