STRINGSTRING
L484_021787 L484_021787 L484_008614 L484_008614 L484_011279 L484_011279 L484_003978 L484_003978 L484_027112 L484_027112 L484_026877 L484_026877 L484_022110 L484_022110 L484_013318 L484_013318 L484_019889 L484_019889 L484_022923 L484_022923 L484_017131 L484_017131
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
L484_021787Squamosa promoter-binding-like protein 7. (433 aa)    
Predicted Functional Partners:
L484_008614
Crossover junction endonuclease MUS81.
    
 0.617
L484_011279
CHCH domain-containing protein.
   
   0.511
L484_003978
Floricaula/leafy-like transcription factor; Probable transcription factor. Belongs to the FLO/LFY family.
      
 0.509
L484_027112
DNA ligase.
     
 0.508
L484_026877
Uncharacterized protein.
    
   0.505
L484_022110
Small nuclear ribonucleoprotein Sm D1; Involved in splicing regulation. Facilitates post- transcriptional gene silencing (PTGS) by limiting the degradation of transgene aberrant RNAs by the RNA quality control (RQC) machinery, thus favoring their entry into cytoplasmic siRNA bodies where they can trigger PTGS. Does not participate in the production of small RNAs. Belongs to the snRNP core protein family.
    
 0.502
L484_013318
BHLH domain-containing protein.
  
 
  0.493
L484_019889
Putative calcium-binding protein CML43.
    
 
 0.489
L484_022923
BHLH domain-containing protein.
  
 
   0.482
L484_017131
Small nuclear ribonucleoprotein E; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family.
   
 0.472
Your Current Organism:
Morus notabilis
NCBI taxonomy Id: 981085
Other names: M. notabilis, Morus notabilis C.K.Schneid.
Server load: low (22%) [HD]