Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
L484_004072 | L484_013654 | W9QQI9 | W9QUP9 | Homeobox protein. | E3 ubiquitin-protein ligase UPL5. | 0.416 |
L484_004072 | L484_016952 | W9QQI9 | W9QN79 | Homeobox protein. | BEL1-like homeodomain protein 9. | 0.663 |
L484_004072 | L484_019517 | W9QQI9 | W9RE35 | Homeobox protein. | Homeobox protein ATH1. | 0.523 |
L484_004072 | L484_024238 | W9QQI9 | W9QPI1 | Homeobox protein. | Homeobox protein BEL1-like protein. | 0.488 |
L484_013654 | L484_004072 | W9QUP9 | W9QQI9 | E3 ubiquitin-protein ligase UPL5. | Homeobox protein. | 0.416 |
L484_013654 | L484_016952 | W9QUP9 | W9QN79 | E3 ubiquitin-protein ligase UPL5. | BEL1-like homeodomain protein 9. | 0.416 |
L484_013654 | L484_019517 | W9QUP9 | W9RE35 | E3 ubiquitin-protein ligase UPL5. | Homeobox protein ATH1. | 0.416 |
L484_013654 | L484_024238 | W9QUP9 | W9QPI1 | E3 ubiquitin-protein ligase UPL5. | Homeobox protein BEL1-like protein. | 0.416 |
L484_016952 | L484_004072 | W9QN79 | W9QQI9 | BEL1-like homeodomain protein 9. | Homeobox protein. | 0.663 |
L484_016952 | L484_013654 | W9QN79 | W9QUP9 | BEL1-like homeodomain protein 9. | E3 ubiquitin-protein ligase UPL5. | 0.416 |
L484_019517 | L484_004072 | W9RE35 | W9QQI9 | Homeobox protein ATH1. | Homeobox protein. | 0.523 |
L484_019517 | L484_013654 | W9RE35 | W9QUP9 | Homeobox protein ATH1. | E3 ubiquitin-protein ligase UPL5. | 0.416 |
L484_024238 | L484_004072 | W9QPI1 | W9QQI9 | Homeobox protein BEL1-like protein. | Homeobox protein. | 0.488 |
L484_024238 | L484_013654 | W9QPI1 | W9QUP9 | Homeobox protein BEL1-like protein. | E3 ubiquitin-protein ligase UPL5. | 0.416 |