Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
L484_006824 | L484_019970 | W9RDL4 | W9R7M1 | Zinc finger protein CONSTANS-LIKE 5. | Zinc finger protein CONSTANS-LIKE 16. | 0.477 |
L484_007188 | L484_019970 | W9REL7 | W9R7M1 | Zinc finger protein CONSTANS-LIKE 1. | Zinc finger protein CONSTANS-LIKE 16. | 0.434 |
L484_016260 | L484_019970 | W9R0E5 | W9R7M1 | Zinc finger protein CONSTANS. | Zinc finger protein CONSTANS-LIKE 16. | 0.453 |
L484_019970 | L484_006824 | W9R7M1 | W9RDL4 | Zinc finger protein CONSTANS-LIKE 16. | Zinc finger protein CONSTANS-LIKE 5. | 0.477 |
L484_019970 | L484_007188 | W9R7M1 | W9REL7 | Zinc finger protein CONSTANS-LIKE 16. | Zinc finger protein CONSTANS-LIKE 1. | 0.434 |
L484_019970 | L484_016260 | W9R7M1 | W9R0E5 | Zinc finger protein CONSTANS-LIKE 16. | Zinc finger protein CONSTANS. | 0.453 |
L484_019970 | L484_023788 | W9R7M1 | W9R562 | Zinc finger protein CONSTANS-LIKE 16. | Uncharacterized protein. | 0.414 |
L484_019970 | THI1 | W9R7M1 | W9S2E9 | Zinc finger protein CONSTANS-LIKE 16. | Thiamine thiazole synthase, chloroplastic; Involved in biosynthesis of the thiamine precursor thiazole. Catalyzes the conversion of NAD and glycine to adenosine diphosphate 5- (2-hydroxyethyl)-4-methylthiazole-2-carboxylic acid (ADT), an adenylated thiazole intermediate. The reaction includes an iron- dependent sulfide transfer from a conserved cysteine residue of the protein to a thiazole intermediate. The enzyme can only undergo a single turnover, which suggests it is a suicide enzyme. May have additional roles in adaptation to various stress conditions and in DNA damage tolerance; B [...] | 0.605 |
L484_023788 | L484_019970 | W9R562 | W9R7M1 | Uncharacterized protein. | Zinc finger protein CONSTANS-LIKE 16. | 0.414 |
THI1 | L484_019970 | W9S2E9 | W9R7M1 | Thiamine thiazole synthase, chloroplastic; Involved in biosynthesis of the thiamine precursor thiazole. Catalyzes the conversion of NAD and glycine to adenosine diphosphate 5- (2-hydroxyethyl)-4-methylthiazole-2-carboxylic acid (ADT), an adenylated thiazole intermediate. The reaction includes an iron- dependent sulfide transfer from a conserved cysteine residue of the protein to a thiazole intermediate. The enzyme can only undergo a single turnover, which suggests it is a suicide enzyme. May have additional roles in adaptation to various stress conditions and in DNA damage tolerance; B [...] | Zinc finger protein CONSTANS-LIKE 16. | 0.605 |