STRINGSTRING
L484_004207 L484_004207 L484_024453 L484_024453 L484_024999 L484_024999 L484_001656 L484_001656 L484_023977 L484_023977 L484_021283 L484_021283 L484_015215 L484_015215 L484_006393 L484_006393 L484_003899 L484_003899 L484_007346 L484_007346 L484_005507 L484_005507
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
L484_004207GRAS domain-containing protein; Belongs to the GRAS family. (609 aa)    
Predicted Functional Partners:
L484_024453
E3 ubiquitin-protein ligase UPL4.
   
 0.842
L484_024999
E3 ubiquitin-protein ligase UPL3.
   
 0.830
L484_001656
Ubiquitin-60S ribosomal protein L40.
   
 0.801
L484_023977
E3 ubiquitin-protein ligase KEG.
    
 0.767
L484_021283
E3 ubiquitin-protein ligase; Ubiquitin ligase protein which is a component of the N-end rule pathway. Recognizes and binds to proteins bearing specific N- terminal residues that are destabilizing according to the N-end rule, leading to their ubiquitination and subsequent degradation.
   
 
 0.763
L484_015215
E3 ubiquitin-protein ligase PRT1.
    
 0.672
L484_006393
Anaphase-promoting complex subunit 4.
    
 0.632
L484_003899
Anaphase-promoting complex subunit 6.
    
 0.628
L484_007346
NEDD8-activating enzyme E1 catalytic subunit.
   
 0.626
L484_005507
Ubiquitin-like modifier-activating enzyme 5.
   
 0.626
Your Current Organism:
Morus notabilis
NCBI taxonomy Id: 981085
Other names: M. notabilis, Morus notabilis C.K.Schneid.
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