STRINGSTRING
L484_013431 L484_013431 L484_009572 L484_009572 L484_013219 L484_013219 L484_007161 L484_007161 L484_009305 L484_009305 L484_010244 L484_010244 L484_007884 L484_007884 L484_013765 L484_013765 L484_008993 L484_008993 L484_014547 L484_014547 L484_015424 L484_015424
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
L484_013431Nuclear receptor corepressor 1. (1731 aa)    
Predicted Functional Partners:
L484_009572
Transcription initiation factor TFIID subunit 9.
    
 0.924
L484_013219
Transcription initiation factor TFIID subunit 5.
   
 0.916
L484_007161
Transcription initiation factor TFIID subunit 10; TAFs are components of the transcription factor IID (TFIID) complex that is essential for mediating regulation of RNA polymerase transcription; Belongs to the TAF10 family.
    
 0.915
L484_009305
F-box-like/WD repeat-containing protein.
   
 0.889
L484_010244
F-box-like/WD repeat-containing protein.
   
 0.889
L484_007884
Uncharacterized protein.
   
 0.889
L484_013765
Histone deacetylase; Belongs to the histone deacetylase family. HD Type 1 subfamily.
    
 0.879
L484_008993
Histone deacetylase; Belongs to the histone deacetylase family. HD Type 1 subfamily.
    
 0.879
L484_014547
Histone deacetylase; Belongs to the histone deacetylase family. HD Type 1 subfamily.
    
 0.879
L484_015424
Transcription initiation factor TFIID subunit 12.
    
 0.863
Your Current Organism:
Morus notabilis
NCBI taxonomy Id: 981085
Other names: M. notabilis, Morus notabilis C.K.Schneid.
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