STRINGSTRING
L484_014296 L484_014296 L484_020038 L484_020038 L484_006183 L484_006183 L484_027813 L484_027813 L484_014335 L484_014335 L484_027952 L484_027952 L484_012631 L484_012631 L484_018312 L484_018312 L484_011658 L484_011658 L484_011657 L484_011657
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
L484_014296Agamous-like MADS-box protein AGL12. (271 aa)    
Predicted Functional Partners:
L484_020038
Threonine--tRNA ligase.
   
  
 0.637
L484_006183
5'-3' exoribonuclease; Possesses 5'->3' exoribonuclease activity. Acts as an endogenous post-transcriptional gene silencing (PTGS) suppressor.
      
 0.561
L484_027813
Threonine--tRNA ligase.
   
  
 0.558
L484_014335
Rop guanine nucleotide exchange factor 1.
      
 0.556
L484_027952
Periodic tryptophan protein 1-like protein.
      
 0.554
L484_012631
Endoglucanase.
      
 0.509
L484_018312
Agamous-like MADS-box protein AGL80.
  
     0.478
L484_011658
Rop guanine nucleotide exchange factor 1.
      
 0.422
L484_011657
Rop guanine nucleotide exchange factor 1.
      
 0.422
Your Current Organism:
Morus notabilis
NCBI taxonomy Id: 981085
Other names: M. notabilis, Morus notabilis C.K.Schneid.
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