STRINGSTRING
L484_018292 L484_018292 L484_008614 L484_008614 L484_013643 L484_013643 L484_027059 L484_027059 L484_011279 L484_011279 L484_026345 L484_026345 L484_027112 L484_027112 L484_027073 L484_027073 L484_026877 L484_026877 L484_003293 L484_003293 L484_022110 L484_022110
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
L484_018292Uncharacterized protein. (427 aa)    
Predicted Functional Partners:
L484_008614
Crossover junction endonuclease MUS81.
    
 0.617
L484_013643
Uncharacterized protein.
  
  0.518
L484_027059
Uncharacterized protein.
  
 
  0.513
L484_011279
CHCH domain-containing protein.
   
   0.511
L484_026345
Uncharacterized protein.
  
  0.508
L484_027112
DNA ligase.
     
 0.508
L484_027073
Putative receptor-like protein kinase.
  
 
  0.506
L484_026877
Uncharacterized protein.
    
   0.505
L484_003293
Uncharacterized protein.
  
 
   0.504
L484_022110
Small nuclear ribonucleoprotein Sm D1; Involved in splicing regulation. Facilitates post- transcriptional gene silencing (PTGS) by limiting the degradation of transgene aberrant RNAs by the RNA quality control (RQC) machinery, thus favoring their entry into cytoplasmic siRNA bodies where they can trigger PTGS. Does not participate in the production of small RNAs. Belongs to the snRNP core protein family.
    
 0.502
Your Current Organism:
Morus notabilis
NCBI taxonomy Id: 981085
Other names: M. notabilis, Morus notabilis C.K.Schneid.
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