Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
DREB3A | L484_015167 | W6FHL5 | W9SB33 | Dehydration responsive element binding transcription factor. | B3 domain-containing transcription factor ABI3. | 0.678 |
DREB3A | L484_015406 | W6FHL5 | W9RNY2 | Dehydration responsive element binding transcription factor. | Protein ABSCISIC ACID-INSENSITIVE 5. | 0.568 |
L484_005801 | L484_015167 | W9S2I7 | W9SB33 | Uncharacterized protein. | B3 domain-containing transcription factor ABI3. | 0.452 |
L484_008582 | L484_015167 | W9QJJ2 | W9SB33 | Two-component response regulator-like protein. | B3 domain-containing transcription factor ABI3. | 0.557 |
L484_008937 | L484_015167 | W9QL78 | W9SB33 | GTD-binding domain-containing protein. | B3 domain-containing transcription factor ABI3. | 0.490 |
L484_008937 | L484_025489 | W9QL78 | W9RWW3 | GTD-binding domain-containing protein. | Myb_DNA-bind_3 domain-containing protein. | 0.456 |
L484_010734 | L484_010889 | W9S793 | W9RM10 | Malic enzyme. | RNA-dependent RNA polymerase; Probably involved in the RNA silencing pathway and required for the generation of small interfering RNAs (siRNAs). Belongs to the RdRP family. | 0.952 |
L484_010734 | L484_015167 | W9S793 | W9SB33 | Malic enzyme. | B3 domain-containing transcription factor ABI3. | 0.480 |
L484_010734 | L484_026273 | W9S793 | W9R6C1 | Malic enzyme. | Malic enzyme. | 0.952 |
L484_010889 | L484_010734 | W9RM10 | W9S793 | RNA-dependent RNA polymerase; Probably involved in the RNA silencing pathway and required for the generation of small interfering RNAs (siRNAs). Belongs to the RdRP family. | Malic enzyme. | 0.952 |
L484_010889 | L484_015167 | W9RM10 | W9SB33 | RNA-dependent RNA polymerase; Probably involved in the RNA silencing pathway and required for the generation of small interfering RNAs (siRNAs). Belongs to the RdRP family. | B3 domain-containing transcription factor ABI3. | 0.480 |
L484_010889 | L484_026273 | W9RM10 | W9R6C1 | RNA-dependent RNA polymerase; Probably involved in the RNA silencing pathway and required for the generation of small interfering RNAs (siRNAs). Belongs to the RdRP family. | Malic enzyme. | 0.952 |
L484_015167 | DREB3A | W9SB33 | W6FHL5 | B3 domain-containing transcription factor ABI3. | Dehydration responsive element binding transcription factor. | 0.678 |
L484_015167 | L484_005801 | W9SB33 | W9S2I7 | B3 domain-containing transcription factor ABI3. | Uncharacterized protein. | 0.452 |
L484_015167 | L484_008582 | W9SB33 | W9QJJ2 | B3 domain-containing transcription factor ABI3. | Two-component response regulator-like protein. | 0.557 |
L484_015167 | L484_008937 | W9SB33 | W9QL78 | B3 domain-containing transcription factor ABI3. | GTD-binding domain-containing protein. | 0.490 |
L484_015167 | L484_010734 | W9SB33 | W9S793 | B3 domain-containing transcription factor ABI3. | Malic enzyme. | 0.480 |
L484_015167 | L484_010889 | W9SB33 | W9RM10 | B3 domain-containing transcription factor ABI3. | RNA-dependent RNA polymerase; Probably involved in the RNA silencing pathway and required for the generation of small interfering RNAs (siRNAs). Belongs to the RdRP family. | 0.480 |
L484_015167 | L484_015406 | W9SB33 | W9RNY2 | B3 domain-containing transcription factor ABI3. | Protein ABSCISIC ACID-INSENSITIVE 5. | 0.654 |
L484_015167 | L484_018636 | W9SB33 | W9RHQ9 | B3 domain-containing transcription factor ABI3. | E3 ubiquitin-protein ligase AIP2. | 0.641 |
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