Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
L484_003662 | L484_023563 | W9RWU8 | W9R714 | Protein phosphatase 2C and cyclic nucleotide-binding/kinase domain-containing protein. | Chromatin structure-remodeling complex subunit snf21. | 0.437 |
L484_003662 | L484_023564 | W9RWU8 | W9RVK1 | Protein phosphatase 2C and cyclic nucleotide-binding/kinase domain-containing protein. | SWI/SNF chromatin-remodeling complex subunit snf22. | 0.437 |
L484_003662 | L484_026573 | W9RWU8 | W9SMQ7 | Protein phosphatase 2C and cyclic nucleotide-binding/kinase domain-containing protein. | C2H2-type domain-containing protein. | 0.636 |
L484_005277 | L484_011653 | W9R0P7 | W9RN13 | High mobility group B protein 10. | High mobility group B protein 9. | 0.856 |
L484_005277 | L484_021612 | W9R0P7 | W9RXY4 | High mobility group B protein 10. | High mobility group B protein 15. | 0.773 |
L484_005277 | L484_023563 | W9R0P7 | W9R714 | High mobility group B protein 10. | Chromatin structure-remodeling complex subunit snf21. | 0.938 |
L484_005277 | L484_023564 | W9R0P7 | W9RVK1 | High mobility group B protein 10. | SWI/SNF chromatin-remodeling complex subunit snf22. | 0.938 |
L484_005277 | L484_023658 | W9R0P7 | W9RGW6 | High mobility group B protein 10. | Putative high mobility group B protein 11. | 0.766 |
L484_005277 | L484_026573 | W9R0P7 | W9SMQ7 | High mobility group B protein 10. | C2H2-type domain-containing protein. | 0.599 |
L484_006282 | L484_019603 | W9QU91 | W9S400 | Uncharacterized protein. | NAC domain-containing protein 69. | 0.539 |
L484_006282 | L484_026573 | W9QU91 | W9SMQ7 | Uncharacterized protein. | C2H2-type domain-containing protein. | 0.590 |
L484_011653 | L484_005277 | W9RN13 | W9R0P7 | High mobility group B protein 9. | High mobility group B protein 10. | 0.856 |
L484_011653 | L484_021612 | W9RN13 | W9RXY4 | High mobility group B protein 9. | High mobility group B protein 15. | 0.772 |
L484_011653 | L484_023563 | W9RN13 | W9R714 | High mobility group B protein 9. | Chromatin structure-remodeling complex subunit snf21. | 0.938 |
L484_011653 | L484_023564 | W9RN13 | W9RVK1 | High mobility group B protein 9. | SWI/SNF chromatin-remodeling complex subunit snf22. | 0.938 |
L484_011653 | L484_023658 | W9RN13 | W9RGW6 | High mobility group B protein 9. | Putative high mobility group B protein 11. | 0.766 |
L484_011653 | L484_026573 | W9RN13 | W9SMQ7 | High mobility group B protein 9. | C2H2-type domain-containing protein. | 0.599 |
L484_019603 | L484_006282 | W9S400 | W9QU91 | NAC domain-containing protein 69. | Uncharacterized protein. | 0.539 |
L484_019603 | L484_026573 | W9S400 | W9SMQ7 | NAC domain-containing protein 69. | C2H2-type domain-containing protein. | 0.588 |
L484_020137 | L484_026573 | W9R9U6 | W9SMQ7 | Nitrate reductase; Nitrate reductase is a key enzyme involved in the first step of nitrate assimilation in plants, fungi and bacteria. | C2H2-type domain-containing protein. | 0.885 |
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