STRINGSTRING
LOC104587210 LOC104587210 LOC104586382 LOC104586382 LOC104596056 LOC104596056 LOC104596270 LOC104596270 TTG1 TTG1 LOC104600617 LOC104600617 LOC104609359 LOC104609359
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC104587210Transcription factor WER-like. (222 aa)    
Predicted Functional Partners:
LOC104586382
Transcription factor GLABRA 3-like isoform X1.
    
 
 0.613
LOC104596056
Transcription factor GLABRA 3-like.
    
 
 0.613
LOC104596270
Pentatricopeptide repeat-containing protein At1g11290, chloroplastic-like.
    
 
 0.613
TTG1
Protein TRANSPARENT TESTA GLABRA 1.
   
 
 0.507
LOC104600617
Nuclear transcription factor Y subunit A-3-like isoform X1.
      
 0.420
LOC104609359
Nuclear transcription factor Y subunit A-3-like.
      
 0.420
Your Current Organism:
Nelumbo nucifera
NCBI taxonomy Id: 4432
Other names: Indian lotus, N. nucifera, Nelumbo nucifera Gaertn., padma, sacred lotus
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