STRINGSTRING
LOC104590489 LOC104590489 LOC104606335 LOC104606335 LOC104602620 LOC104602620 LOC104597872 LOC104597872 LOC104599910 LOC104599910 LOC104588279 LOC104588279 LOC104590856 LOC104590856 LOC104602718 LOC104602718
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC104590489Zinc finger CCCH domain-containing protein 14-like. (253 aa)    
Predicted Functional Partners:
LOC104606335
Exosome complex component RRP43 isoform X1.
    
  0.600
LOC104602620
mRNA-decapping enzyme subunit 2.
   
 0.541
LOC104597872
D-aminoacyl-tRNA deacylase-like.
    
 0.479
LOC104599910
D-aminoacyl-tRNA deacylase-like isoform X1.
    
 0.479
LOC104588279
Exosome complex exonuclease RRP46 homolog.
    
  0.447
LOC104590856
Exosome complex component RRP4 homolog.
    
 0.445
LOC104602718
Exosome complex component CSL4.
     
 0.444
Your Current Organism:
Nelumbo nucifera
NCBI taxonomy Id: 4432
Other names: Indian lotus, N. nucifera, Nelumbo nucifera Gaertn., padma, sacred lotus
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