STRINGSTRING
LOC104595949 LOC104595949 LOC104603967 LOC104603967 LOC104608616 LOC104608616 LOC104587084 LOC104587084 LOC104593839 LOC104593839 LOC104612661 LOC104612661 LOC104593612 LOC104593612 LOC104604178 LOC104604178 LOC104605928 LOC104605928 LOC104600091 LOC104600091
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC104595949Scarecrow-like protein 15; Belongs to the GRAS family. (549 aa)    
Predicted Functional Partners:
LOC104603967
Transport inhibitor response 1-like protein isoform X1.
      
 0.493
LOC104608616
Transport inhibitor response 1-like protein.
      
 0.493
LOC104587084
Expansin-like A1; Belongs to the expansin family.
    
 
 0.484
LOC104593839
Squamosa promoter-binding-like protein 3 isoform X1.
      
 0.483
LOC104612661
Squamosa promoter-binding-like protein 3 isoform X1.
      
 0.483
LOC104593612
Transcription factor GAMYB.
      
 0.459
LOC104604178
Transcription factor GAMYB isoform X1.
      
 0.459
LOC104605928
acetyl-CoA carboxylase 1-like.
      
 0.453
LOC104600091
acetyl-CoA carboxylase 1-like.
      
 0.453
Your Current Organism:
Nelumbo nucifera
NCBI taxonomy Id: 4432
Other names: Indian lotus, N. nucifera, Nelumbo nucifera Gaertn., padma, sacred lotus
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