STRINGSTRING
LOC104596224 LOC104596224 LOC104586251 LOC104586251 LOC104597559 LOC104597559 LOC104603552 LOC104603552 LFY LFY SEP3 SEP3 LOC104594017 LOC104594017
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC104596224MADS-box transcription factor 6. (241 aa)    
Predicted Functional Partners:
LOC104586251
Actin-101.
      
 0.565
LOC104597559
Actin.
      
 0.565
LOC104603552
Actin.
      
 0.565
LFY
Floricaula/leafy-like transcription factor; Probable transcription factor. Belongs to the FLO/LFY family.
    
 
 0.472
SEP3
Agamous-like MADS-box protein AGL9 homolog.
  
 
0.452
LOC104594017
DNA excision repair protein ERCC-1 isoform X1.
      
 0.439
Your Current Organism:
Nelumbo nucifera
NCBI taxonomy Id: 4432
Other names: Indian lotus, N. nucifera, Nelumbo nucifera Gaertn., padma, sacred lotus
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