STRINGSTRING
LOC104601593 LOC104601593 LOC104607638 LOC104607638 LOC104600524 LOC104600524 LOC104598979 LOC104598979 LOC104601469 LOC104601469 LOC104597915 LOC104597915 LOC104596531 LOC104596531 LOC104605292 LOC104605292 LOC104609534 LOC104609534 LOC104612419 LOC104612419 rps14 rps14
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC104601593Telomere repeat-binding factor 1-like. (301 aa)    
Predicted Functional Partners:
LOC104607638
ubiquitin-60S ribosomal protein L40.
   
 0.971
LOC104600524
40S ribosomal protein S29.
  
 0.963
LOC104598979
40S ribosomal protein S21-2-like isoform X1.
   
 0.963
LOC104601469
60S ribosomal protein L18a; Belongs to the eukaryotic ribosomal protein eL20 family.
   
 
 0.931
LOC104597915
60S ribosomal protein L39.
   
 
 0.930
LOC104596531
40S ribosomal protein S24; Belongs to the eukaryotic ribosomal protein eS24 family.
   
 0.929
LOC104605292
40S ribosomal protein S24; Belongs to the eukaryotic ribosomal protein eS24 family.
   
 0.929
LOC104609534
40S ribosomal protein S15 isoform X1; Belongs to the universal ribosomal protein uS19 family.
  
 0.929
LOC104612419
40S ribosomal protein S15-like; Belongs to the universal ribosomal protein uS19 family.
  
 0.929
rps14
30S ribosomal protein S14, chloroplastic; Binds 16S rRNA, required for the assembly of 30S particles.
  
 0.922
Your Current Organism:
Nelumbo nucifera
NCBI taxonomy Id: 4432
Other names: Indian lotus, N. nucifera, Nelumbo nucifera Gaertn., padma, sacred lotus
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