STRINGSTRING
LOC104603172 LOC104603172 LOC104600899 LOC104600899 LOC104601485 LOC104601485 LOC104595148 LOC104595148 LOC104593575 LOC104593575 LOC104600585 LOC104600585
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC104603172AP2-like ethylene-responsive transcription factor AIL5. (528 aa)    
Predicted Functional Partners:
LOC104600899
Ribosomal RNA small subunit methyltransferase nep-1.
      
 0.476
LOC104601485
Uncharacterized protein LOC104601485 isoform X1.
      
 0.476
LOC104595148
Bark storage protein A.
      
 0.457
LOC104593575
Histidinol dehydrogenase, chloroplastic isoform X1; Belongs to the histidinol dehydrogenase family.
      
 0.441
LOC104600585
Cytokinin dehydrogenase 7.
      
 0.420
Your Current Organism:
Nelumbo nucifera
NCBI taxonomy Id: 4432
Other names: Indian lotus, N. nucifera, Nelumbo nucifera Gaertn., padma, sacred lotus
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