STRINGSTRING
LOC104604178 LOC104604178 LOC104607108 LOC104607108 LOC104611250 LOC104611250 LOC104601965 LOC104601965 LOC104595293 LOC104595293 LOC104592329 LOC104592329 LOC104602437 LOC104602437 LOC104609975 LOC104609975 LOC104595949 LOC104595949 LOC104612105 LOC104612105
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC104604178Transcription factor GAMYB isoform X1. (557 aa)    
Predicted Functional Partners:
LOC104607108
1-cysteine peroxiredoxin.
   
  
 0.598
LOC104611250
1-Cys peroxiredoxin-like.
   
  
 0.598
LOC104601965
CCG-binding protein 1.
      
 0.593
LOC104595293
DELLA protein GAI-like; Belongs to the GRAS family.
      
 0.570
LOC104592329
DELLA protein SLR1-like; Belongs to the GRAS family.
      
 0.570
LOC104602437
DELLA protein GAI1; Belongs to the GRAS family.
      
 0.570
LOC104609975
DELLA protein GAI1-like; Belongs to the GRAS family.
      
 0.570
LOC104595949
Scarecrow-like protein 15; Belongs to the GRAS family.
      
 0.459
LOC104612105
Transcription factor TCP4.
      
 0.416
Your Current Organism:
Nelumbo nucifera
NCBI taxonomy Id: 4432
Other names: Indian lotus, N. nucifera, Nelumbo nucifera Gaertn., padma, sacred lotus
Server load: low (22%) [HD]