STRINGSTRING
LOC104605119 LOC104605119 LOC104587828 LOC104587828 LOC104585748 LOC104585748 LOC104585772 LOC104585772 LOC104589275 LOC104589275 LOC104599594 LOC104599594 LOC104590808 LOC104590808 LOC104609428 LOC104609428 TTG1 TTG1 LOC104598048 LOC104598048 LOC104599671 LOC104599671
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC104605119Myb-related protein P-like. (410 aa)    
Predicted Functional Partners:
LOC104587828
Kinetochore protein nuf2.
   
  
 0.516
LOC104585748
Dihydroflavonol 4-reductase isoform X1.
      
 0.503
LOC104585772
Protein LHY-like.
      
 0.499
LOC104589275
Peroxidase; Removal of H(2)O(2), oxidation of toxic reductants, biosynthesis and degradation of lignin, suberization, auxin catabolism, response to environmental stresses such as wounding, pathogen attack and oxidative stress.
      
 0.451
LOC104599594
Peroxidase; Removal of H(2)O(2), oxidation of toxic reductants, biosynthesis and degradation of lignin, suberization, auxin catabolism, response to environmental stresses such as wounding, pathogen attack and oxidative stress.
      
 0.451
LOC104590808
Probable protein phosphatase 2C 75 isoform X1.
      
 0.444
LOC104609428
Protein TRANSPARENT TESTA 1-like.
   
 
 0.437
TTG1
Protein TRANSPARENT TESTA GLABRA 1.
   
  
 0.426
LOC104598048
Non-specific serine/threonine protein kinase.
    
 
 0.426
LOC104599671
Non-specific serine/threonine protein kinase.
    
 
 0.426
Your Current Organism:
Nelumbo nucifera
NCBI taxonomy Id: 4432
Other names: Indian lotus, N. nucifera, Nelumbo nucifera Gaertn., padma, sacred lotus
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